RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 RAB19A4D1S5 217 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 MEGF11A6BM72 1044 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 SSX5O60225 188 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 NKX2-2O95096 273 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 MPZL1O95297 269 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 FABP1P07148 127 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 MST1P26927 711 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 ADH6P28332 368 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 RBMXP38159 391 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 SLC17A1Q14916 467 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 NR0B2Q15466 257 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 ELAVL1Q15717 326 aaKnown RBP12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 FCRL6Q6DN72 434 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 TANGO2Q6ICL3 276 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 TTLL10Q6ZVT0 673 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 ROBO4Q8WZ75 1007 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 THRSPQ92748 146 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 AKR1E2Q96JD6 320 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 SEMA6CQ9H3T2 930 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 KIF26BQ2KJY2 2108 aa12.52□□□□□ -0.41
UBE2D3-210ENST00000453744 A0A087WV62 115 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 LOC107986453A0A1B0GWG9 222 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 ZNF264O43296 627 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 ZNF254O75437 659 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 UPK3AO75631 287 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 ALOX5APP20292 161 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 IL10RAQ13651 578 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 PABPC1L2AQ5JQF8 200 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 NUP54Q7Z3B4 507 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 CA13Q8N1Q1 262 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 CTSFQ9UBX1 484 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 METTL12A8MUP2 240 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 GPR89AB7ZAQ6 455 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 LRP3O75074 770 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 GPR89BP0CG08 455 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 HSD11B1P28845 292 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 SRSF3P84103 164 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 EIF2S3LQ2VIR3 472 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 TMEM184AQ6ZMB5 413 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 MAMDC2Q7Z304 686 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 SPRED2Q7Z698 418 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 LMF2Q9BU23 707 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 MPDZO75970 2070 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 CACNA1GO43497 2377 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 PHYHO14832 338 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 NQO2P16083 231 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 RFC3P40938 356 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 NR0B1P51843 470 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 CSNK2A1P68400 391 aaPredicted RBP12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 CYCSP99999 105 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 DHODHQ02127 395 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 ACKR1Q16570 336 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 ZNF74Q16587 644 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 ADAD2Q8NCV1 583 aaKnown RBP12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 CSNK2A3Q8NEV1 391 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 OR5H2Q8NGV7 314 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 NUDT22Q9BRQ3 303 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 OR11A1Q9GZK7 315 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 ZNF700Q9H0M5 742 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 UBQLN4Q9NRR5 601 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 UQCC1Q9NVA1 299 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 ANKRD10Q9NXR5 420 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 VSIG4Q9Y279 399 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 MEMO1Q9Y316 297 aa12.51□□□□□ -0.41
UBE2D3-210ENST00000453744 COL4A4P53420 1690 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 CPED1A4D0V7 1026 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 C2orf72A6NCS6 295 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 CRTAPO75718 401 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 PTGFRP43088 359 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 ADPRHP54922 357 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 GLO1Q04760 184 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 SGCAQ16586 387 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 LPCAT3Q6P1A2 487 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 CRIPAKQ8N1N5 446 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 TMEM229BQ8NBD8 167 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 MFSD8Q8NHS3 518 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 S100PBPQ96BU1 408 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 ARHGEF17Q96PE2 2063 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 C9orf170A2RU37 121 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 OR6C65A6NJZ3 312 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 SLC33A1O00400 549 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 CARD17Q5XLA6 110 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 DCXRQ7Z4W1 244 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 GPX8Q8TED1 209 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 MMP25Q9NPA2 562 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 SMCO4Q9NRQ5 59 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 THAP10Q9P2Z0 257 aaPredicted RBP12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 TRBV23-1A0A0A0MS06 115 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 OIP5O43482 229 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 ACTL6AO96019 429 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 RAB38P57729 211 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 HFEQ30201 348 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 LINC01590Q5TEZ4 76 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 MOB3CQ70IA8 216 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 TSPAN32Q96QS1 320 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 SLC19A3Q9BZV2 496 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 SPTA1P02549 2419 aa12.5□□□□□ -0.41
UBE2D3-210ENST00000453744 PLXNB3Q9ULL4 1909 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms