RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SPANXN2Q5MJ10 180 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 DDI2Q5TDH0 399 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 C16orf87Q6PH81 154 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 KLHL24Q6TFL4 600 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 PLXDC2Q6UX71 529 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 Q6ZS92 163 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 BTLAQ7Z6A9 289 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 GJC3Q8NFK1 279 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 ACOT12Q8WYK0 555 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 CEP19Q96LK0 163 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 ALKBH3Q96Q83 286 aaPredicted RBP12.57□□□□□ -0.4
USP39-207ENST00000450066 PRDM14Q9GZV8 571 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 SLCO5A1Q9H2Y9 848 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 GPR35Q9HC97 309 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 FAM206AQ9NX38 181 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 OR52A1Q9UKL2 312 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 ZNF175Q9Y473 711 aa12.57□□□□□ -0.4
USP39-207ENST00000450066 PHF3Q92576 2039 aaKnown RBP12.56□□□□□ -0.4
USP39-207ENST00000450066 A0A0G2JK05 382 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 AQP7O14520 342 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 ISG15P05161 165 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 CD40LGP29965 261 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 MAGEB1P43366 347 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 PPP5CP53041 499 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 HIST1H3AP68431 136 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 HIST2H3PS2Q5TEC6 136 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 SFXN4Q6P4A7 337 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 HIST2H3AQ71DI3 136 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 LINGO2Q7L985 606 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 LAX1Q8IWV1 398 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 OR51A4Q8NGJ6 313 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 OR10AC1Q8NH08 325 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 PPP1R14AQ96A00 147 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 KCTD12Q96CX2 325 aaKnown RBP12.56□□□□□ -0.4
USP39-207ENST00000450066 ABCB9Q9NP78 766 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 DDX28Q9NUL7 540 aaKnown RBP12.56□□□□□ -0.4
USP39-207ENST00000450066 TMEM38BQ9NVV0 291 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 B3GNT3Q9Y2A9 372 aa12.56□□□□□ -0.4
USP39-207ENST00000450066 SPENQ96T58 3664 aaKnown RBP12.56□□□□□ -0.4
USP39-207ENST00000450066 TRBV5-7A0A0A0MS05 114 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 SLC22A20A6NK97 555 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 HSD11B1P28845 292 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 OR10A3P58181 314 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 TAF13Q15543 124 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 CEP78Q5JTW2 689 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 BCL2L15Q5TBC7 163 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 MZT2AQ6P582 158 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 ZNF704Q6ZNC4 412 aaPredicted RBP12.55□□□□□ -0.4
USP39-207ENST00000450066 SIAH3Q8IW03 269 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 MCEMP1Q8IX19 187 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 LRRC18Q8N456 261 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 PARP16Q8N5Y8 322 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 TAAR6Q96RI8 345 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 SLC30A2Q9BRI3 323 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 ZCCHC4Q9H5U6 513 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 CALHM2Q9HA72 323 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 GP6Q9HCN6 339 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 SPTBN4Q9H254 2564 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 NOTOA8MTQ0 251 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 MKRN2OSH3BPM6 223 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 KRT33AO76009 404 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 PDGFAP04085 211 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 CST2P09228 141 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 UBCP0CG48 685 aaKnown RBP12.55□□□□□ -0.4
USP39-207ENST00000450066 FCGR2AP12318 317 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 SOX2P48431 317 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 PSMA6P60900 246 aaKnown RBP12.55□□□□□ -0.4
USP39-207ENST00000450066 GRB2P62993 217 aaKnown RBP12.55□□□□□ -0.4
USP39-207ENST00000450066 STK11Q15831 433 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 CEACAM16Q2WEN9 425 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 TSPO2Q5TGU0 170 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 TMEM106AQ96A25 262 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 MIXL1Q9H2W2 232 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 MOB1AQ9H8S9 216 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 COMMD3Q9UBI1 195 aa12.55□□□□□ -0.4
USP39-207ENST00000450066 TNRC6AQ8NDV7 1962 aaKnown RBP12.54□□□□□ -0.4
USP39-207ENST00000450066 ACACAQ13085 2346 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 PDCD5O14737 125 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 RRP8O43159 456 aaKnown RBP12.54□□□□□ -0.4
USP39-207ENST00000450066 TGM6O95932 706 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 CTSSP25774 331 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 PPP3R1P63098 170 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 NRN1LQ496H8 165 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 IDNKQ5T6J7 187 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 TMEM244Q5VVB8 128 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.54□□□□□ -0.4
USP39-207ENST00000450066 ADGRE4PQ86SQ3 457 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 SYT9Q86SS6 491 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 TSEN15Q8WW01 171 aaKnown RBP12.54□□□□□ -0.4
USP39-207ENST00000450066 FBXO17Q96EF6 278 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 FOXB1Q99853 325 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 SLITRK2Q9H156 845 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 TCF7L1Q9HCS4 588 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 CLEC4AQ9UMR7 237 aa12.54□□□□□ -0.4
USP39-207ENST00000450066 RPL36A-HNRNPH2H7BZ11 118 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 K7ENP7 123 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 EPXP11678 715 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 ACHEP22303 614 aa12.53□□□□□ -0.4
USP39-207ENST00000450066 THBS2P35442 1172 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms