RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 ZNF787Q6DD87 383 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 DCXRQ7Z4W1 244 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 CDC20BQ86Y33 519 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 OR1J2Q8NGS2 313 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 OTOSQ8NHW6 89 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 ST7LQ8TDW4 575 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 FBLIM1Q8WUP2 373 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 MNTQ99583 582 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 COQ7Q99807 217 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 KCNS3Q9BQ31 491 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 YIPF3Q9GZM5 350 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 PNRC2Q9NPJ4 139 aaKnown RBP12.17□□□□□ -0.46
CTSS-202ENST00000448301 RAB26Q9ULW5 256 aa12.17□□□□□ -0.46
CTSS-202ENST00000448301 IGHV2OR16-5A0A0B4J2B6 119 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 ZNF35P13682 527 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 SSTR2P30874 369 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 CALCRP30988 508 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 HTR5AP47898 357 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 GDI2P50395 445 aaKnown RBP12.16□□□□□ -0.46
CTSS-202ENST00000448301 TLE4Q04727 773 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 SPOCK1Q08629 439 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 EIF2B1Q14232 305 aaKnown RBP12.16□□□□□ -0.46
CTSS-202ENST00000448301 THAP5Q7Z6K1 395 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 OR51G2Q8NGK0 314 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 OR1F12Q8NHA8 337 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 CNIH3Q8TBE1 160 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 POM121L2Q96KW2 1035 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 ZNF184Q99676 751 aaPredicted RBP12.16□□□□□ -0.46
CTSS-202ENST00000448301 ATF6BQ99941 703 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 ANKRD60Q9BZ19 345 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 DDX28Q9NUL7 540 aaKnown RBP12.16□□□□□ -0.46
CTSS-202ENST00000448301 TMEM14AQ9Y6G1 99 aa12.16□□□□□ -0.46
CTSS-202ENST00000448301 CRYBG3Q68DQ2 2970 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 LOC100509620A0A075B734 347 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 SHISA9B4DS77 424 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 LYNP07948 512 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 DBTP11182 482 aaKnown RBP12.15□□□□□ -0.46
CTSS-202ENST00000448301 ALOX5APP20292 161 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 MYF6P23409 242 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 ZNF91Q05481 1191 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 ECH1Q13011 328 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 CDK5R2Q13319 367 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 ADAM5Q6NVV9 412 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 TMEM154Q6P9G4 183 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 SLC22A25Q6T423 547 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 ZNF704Q6ZNC4 412 aaPredicted RBP12.15□□□□□ -0.46
CTSS-202ENST00000448301 RHOUQ7L0Q8 258 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 KBTBD8Q8NFY9 601 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 OR10S1Q8NGN2 331 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 RNF133Q8WVZ7 376 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 SLAMF6Q96DU3 332 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 RNFT2Q96EX2 444 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 ABHD6Q9BV23 337 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 CDH20Q9HBT6 801 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 LAMP5Q9UJQ1 280 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 RPL36Q9Y3U8 105 aaKnown RBP12.15□□□□□ -0.46
CTSS-202ENST00000448301 BAHCC1Q9P281 2608 aa12.15□□□□□ -0.46
CTSS-202ENST00000448301 HRNRQ86YZ3 2850 aaPredicted RBP12.14□□□□□ -0.47
CTSS-202ENST00000448301 C5orf49A4QMS7 147 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 ZNF878C9JN71 531 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 ATP6V1G2-DDX39BF2Z307 99 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 PHYHO14832 338 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 ICMTO60725 284 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 PLAUP00749 431 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 CCL2P13500 99 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 NUDT6P53370 316 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 SMN1Q16637 294 aaKnown RBP12.14□□□□□ -0.47
CTSS-202ENST00000448301 KRTAP27-1Q3LI81 207 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 SLC35F2Q8IXU6 374 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 PAQR4Q8N4S7 273 aaPredicted RBP12.14□□□□□ -0.47
CTSS-202ENST00000448301 OR4F15Q8NGB8 312 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 IPCEF1Q8WWN9 437 aaPredicted RBP12.14□□□□□ -0.47
CTSS-202ENST00000448301 DCLRE1CQ96SD1 692 aaKnown RBP12.14□□□□□ -0.47
CTSS-202ENST00000448301 AMELYQ99218 206 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 CLEC4MQ9H2X3 399 aaPredicted RBP12.14□□□□□ -0.47
CTSS-202ENST00000448301 MRPS18AQ9NVS2 196 aaKnown RBP12.14□□□□□ -0.47
CTSS-202ENST00000448301 EXOGQ9Y2C4 368 aaKnown RBP12.14□□□□□ -0.47
CTSS-202ENST00000448301 KLHDC2Q9Y2U9 406 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 DCHS2Q6V1P9 2916 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 CADP27708 2225 aa12.14□□□□□ -0.47
CTSS-202ENST00000448301 A0A1W2PPR1 153 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 J3QRE1 110 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 OR2T7P0C7T2 308 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 CCNOP22674 350 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 PCSK6P29122 969 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 ATP6V1E1P36543 226 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 HCCSP53701 268 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 ACTC1P68032 377 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 ACTA1P68133 377 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 GALK2Q01415 458 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 RAB40BQ12829 278 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 ZNF672Q499Z4 452 aaPredicted RBP12.13□□□□□ -0.47
CTSS-202ENST00000448301 TMEM200AQ86VY9 491 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 NUP37Q8NFH4 326 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 OR2T27Q8NH04 317 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 SMAP2Q8WU79 429 aaPredicted RBP12.13□□□□□ -0.47
CTSS-202ENST00000448301 THEM6Q8WUY1 208 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 ASB17Q8WXJ9 295 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 AMBNQ9NP70 447 aa12.13□□□□□ -0.47
CTSS-202ENST00000448301 COPS3Q9UNS2 423 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms