RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 XRCC3O43542 346 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 FCMRO60667 390 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 AKR7A3O95154 331 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 CD3DP04234 171 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 HOXD11P31277 338 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF85Q03923 595 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ACKR1Q16570 336 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 HAGHQ16775 308 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 FAAP20Q6NZ36 180 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 CCDC190Q86UF4 302 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 SMIM4Q8WVI0 70 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 MS4A4AQ96JQ5 239 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 NEURL2Q9BR09 285 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 UTP23Q9BRU9 249 aaKnown RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 CALHM2Q9HA72 323 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 CHRNA9Q9UGM1 479 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 NSG2Q9Y328 171 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 SLCO1B1Q9Y6L6 691 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF891A8MT65 544 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 EFSO43281 561 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 GLI4P10075 376 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 KIR2DL3P43628 341 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 GABRA4P48169 554 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 AANATQ16613 207 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 C2orf76Q3KRA6 126 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ZBTB37Q5TC79 503 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 MFSD4AQ8N468 514 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF561Q8N587 486 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 OR13C5Q8NGS8 318 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 OR51E1Q8TCB6 317 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 SLAMF6Q96DU3 332 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 REEP6Q96HR9 211 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 C12orf57Q99622 126 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 SUCNR1Q9BXA5 334 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 SPNS1Q9H2V7 528 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ASCC3Q8N3C0 2202 aaKnown RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 RGPD2P0DJD1 1756 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ANKRD61A6NGH8 418 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 HOXC11O43248 304 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ABLIM3O94929 683 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 VAMP5O95183 116 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 SBK3P0C264 359 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 ABOP16442 354 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 CD22P20273 847 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 SOX18P35713 384 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 HSF1Q00613 529 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 EGR3Q06889 387 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 LPAL2Q16609 132 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 FAM26DQ5JW98 314 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 RPUSD3Q6P087 351 aaKnown RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 PLXDC2Q6UX71 529 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 STAC2Q6ZMT1 411 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 H2BFWTQ7Z2G1 175 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 TMEM123Q8N131 208 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 GALNT16Q8N428 558 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 NUDCD2Q8WVJ2 157 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 RHNO1Q9BSD3 238 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 EMC6Q9BV81 110 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 RYDENQ9NUL5 291 aaKnown RBP7.1□□□□□ -1.27
NEDD9-204ENST00000448183 NDRG3Q9UGV2 375 aa7.1□□□□□ -1.27
NEDD9-204ENST00000448183 TNFRSF10CO14798 259 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 DEGS1O15121 323 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 ENSAO43768 121 aaKnown RBP7.09□□□□□ -1.27
NEDD9-204ENST00000448183 ANGPTL7O43827 346 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 SCO1O75880 301 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 OR10J4P0C629 311 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 EDN3P14138 238 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 RPL34P49207 117 aaKnown RBP7.09□□□□□ -1.27
NEDD9-204ENST00000448183 EDDM3BP56851 147 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 H3F3AP84243 136 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF425Q6IV72 752 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 LCN15Q6UWW0 184 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 OR2AE1Q8NHA4 323 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 STT3BQ8TCJ2 826 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 TSLPQ969D9 159 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 LHX4Q969G2 390 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 FBXW5Q969U6 566 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 AUNIPQ9H7T9 357 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 CHST11Q9NPF2 352 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 ZNF346Q9UL40 294 aaKnown RBP7.09□□□□□ -1.27
NEDD9-204ENST00000448183 ARID1AO14497 2285 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 A0A0B4J203 849 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 C4orf47A7E2U8 309 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 K7EQM0 130 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 PTAFRP25105 342 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 DCTDP32321 178 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 SSBP1Q04837 148 aaKnown RBP7.09□□□□□ -1.27
NEDD9-204ENST00000448183 PCK2Q16822 640 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 PRTGQ2VWP7 1150 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 OTUD1Q5VV17 481 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-204ENST00000448183 VHLLQ6RSH7 139 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 DBX2Q6ZNG2 339 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 BPIFCQ8NFQ6 507 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 ZFPM2Q8WW38 1151 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 C2orf50Q96LR7 162 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 OR6C1Q96RD1 312 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 USB1Q9BQ65 265 aaKnown RBP7.09□□□□□ -1.27
NEDD9-204ENST00000448183 CABLES2Q9BTV7 478 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 PLA2G12AQ9BZM1 189 aa7.09□□□□□ -1.27
NEDD9-204ENST00000448183 FGF22Q9HCT0 170 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms