RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 IGHV1OR15-9A0A0B4J2B8 117 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 A0A1W2PNR3 127 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 BHLHE40O14503 412 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 PMP2P02689 132 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 TFPTP0C1Z6 253 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 GNB3P16520 340 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 EMX1Q04741 257 aaPredicted RBP10.23□□□□□ -0.77
FN1-211ENST00000443816 ACVR1Q04771 509 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 ELP2Q6IA86 826 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 Q6ZSR9 355 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 OR11G2Q8NGC1 345 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 CMTM3Q96MX0 182 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 GPR55Q9Y2T6 319 aaPredicted RBP10.23□□□□□ -0.77
FN1-211ENST00000443816 SCN10AQ9Y5Y9 1956 aa10.23□□□□□ -0.77
FN1-211ENST00000443816 SOD1P00441 154 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 CYC1P08574 325 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 TMEM11P17152 192 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 TRIM23P36406 574 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 GABRA4P48169 554 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 RPS27AP62979 156 aaKnown RBP10.22□□□□□ -0.77
FN1-211ENST00000443816 UBA52P62987 128 aaKnown RBP10.22□□□□□ -0.77
FN1-211ENST00000443816 SNTB1Q13884 538 aaKnown RBP10.22□□□□□ -0.77
FN1-211ENST00000443816 CMPK2Q5EBM0 449 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 FAM3DQ96BQ1 224 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 PLA2G2FQ9BZM2 168 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 NTNG1Q9Y2I2 539 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 SOCS6O14544 535 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 LIPCP11150 499 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 HOXD12P35452 270 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 SNRPGP62308 76 aaKnown RBP10.22□□□□□ -0.77
FN1-211ENST00000443816 ACSM1Q08AH1 577 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 ANKRD16Q6P6B7 361 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 FAM71CQ8NEG0 241 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 SLAMF6Q96DU3 332 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 ELMOD3Q96FG2 381 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 DOC2BQ14184 412 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 ADGRG3Q86Y34 549 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 MRPS24Q96EL2 167 aaKnown RBP10.22□□□□□ -0.77
FN1-211ENST00000443816 SLC35E1Q96K37 410 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 CLDN24A6NM45 220 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 RAF1P04049 648 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 GPX2P18283 190 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 LAP3P28838 519 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 SYT14P1Q58G82 188 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 FBXL6Q8N531 539 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 CLDN22Q8N7P3 220 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 GIMAP1Q8WWP7 306 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 PLK3Q9H4B4 646 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 SMCO4Q9NRQ5 59 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 SLC39A9Q9NUM3 307 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 ASH2LQ9UBL3 628 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 NCR1O76036 304 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 PTPN6P29350 595 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 UCNP55089 124 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 TCTN3Q6NUS6 607 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 SLC36A1Q7Z2H8 476 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 TMEM200AQ86VY9 491 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 OR7G2Q8NG99 324 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 OR2M2Q96R28 347 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 ERVMER34-1Q9H9K5 563 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 ONECUT1Q9UBC0 465 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 SCN8AQ9UQD0 1980 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 A0A0D9SG52 128 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 H3BMQ9 156 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 TMEM108Q6UXF1 575 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 RFPL4BQ6ZWI9 263 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 LGALS14Q8TCE9 139 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 WBP2Q969T9 261 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 LIN37Q96GY3 246 aaPredicted RBP10.22□□□□□ -0.77
FN1-211ENST00000443816 TXNIPQ9H3M7 391 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 WDR37Q9Y2I8 494 aa10.22□□□□□ -0.77
FN1-211ENST00000443816 OR5H15A6NDH6 313 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 OR5H14A6NHG9 310 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 OR5H1A6NKK0 313 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 CRYZL1O95825 349 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 RAB6AP20340 208 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 GCAP28676 217 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 UBE2G2P60604 165 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 OR2G6Q5TZ20 316 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 ZNF767PQ75MW2 155 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 CCDC28AQ8IWP9 274 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 EXO1Q9UQ84 846 aaKnown RBP10.21□□□□□ -0.77
FN1-211ENST00000443816 RFC3P40938 356 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 MRPL19P49406 292 aaKnown RBP10.21□□□□□ -0.77
FN1-211ENST00000443816 NKX6-1P78426 367 aaPredicted RBP10.21□□□□□ -0.77
FN1-211ENST00000443816 TFF2Q03403 129 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 ZNF266Q14584 549 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 CLPPQ16740 277 aaPredicted RBP10.21□□□□□ -0.77
FN1-211ENST00000443816 SFXN4Q6P4A7 337 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 GLIPR1L1Q6UWM5 242 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 OR52N1Q8NH53 320 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.21□□□□□ -0.77
FN1-211ENST00000443816 KLK4Q9Y5K2 254 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 GUSBP08236 651 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 OPRL1P41146 370 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 RAP2BP61225 183 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 ADPRMQ3LIE5 342 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 OGFOD3Q6PK18 319 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 OR2AK2Q8NG84 335 aa10.21□□□□□ -0.77
FN1-211ENST00000443816 LCMT2O60294 686 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms