RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 POLR2MP0CAP2 368 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 C1GALT1C1LP0DN25 315 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 EIF2S2P20042 333 aaKnown RBP2.7□□□□□ -1.98
PFDN4-202ENST00000441080 RAB3AP20336 220 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 HCAR3P49019 387 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 P2RX1P51575 399 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 EIF3EP60228 445 aaKnown RBP2.7□□□□□ -1.98
PFDN4-202ENST00000441080 SP4Q02446 784 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 SRSF5Q13243 272 aaKnown RBP2.7□□□□□ -1.98
PFDN4-202ENST00000441080 RCAN2Q14206 197 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 CHRNA6Q15825 494 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 UBE2UQ5VVX9 321 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 GPR107Q5VW38 600 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 SLC25A34Q6PIV7 304 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 LYPD1Q8N2G4 141 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 LRRC29Q8WV35 223 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 TMEM230Q96A57 120 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 EEF1AKMT3Q96AZ1 226 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 FLYWCH2Q96CP2 140 aaKnown RBP2.7□□□□□ -1.98
PFDN4-202ENST00000441080 ECHDC3Q96DC8 303 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 RNF157Q96PX1 679 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 NEUROG2Q9H2A3 272 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 WFDC1Q9HC57 220 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 CCDC59Q9P031 241 aaKnown RBP2.7□□□□□ -1.98
PFDN4-202ENST00000441080 VANGL2Q9ULK5 521 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 OR2AG2A6NM03 316 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 BPY2O14599 106 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 EIF3HO15372 352 aaKnown RBP eCLIP2.69□□□□□ -1.98
PFDN4-202ENST00000441080 CHST1O43916 411 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 ARG1P05089 322 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 PABPC4LP0CB38 370 aaKnown RBP2.69□□□□□ -1.98
PFDN4-202ENST00000441080 ERGP11308 486 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 OPRK1P41145 380 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 KRTAP10-10P60014 251 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 PPP1CBP62140 327 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 PITPNAQ00169 270 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 TGM3Q08188 693 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 LRRC74AQ0VAA2 488 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 SELENBP1Q13228 472 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 CARD17Q5XLA6 110 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 NEGR1Q7Z3B1 354 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 SNX20Q7Z614 316 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 CMC1Q7Z7K0 106 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 OR4K5Q8NGD3 323 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 OR10AD1Q8NGE0 317 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 CAPSLQ8WWF8 208 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 LZTS2Q9BRK4 669 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 RTBDNQ9BSG5 229 aaPredicted RBP2.69□□□□□ -1.98
PFDN4-202ENST00000441080 C20orf24Q9BUV8 137 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 EDA2RQ9HAV5 297 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 RRP15Q9Y3B9 282 aaKnown RBP2.69□□□□□ -1.98
PFDN4-202ENST00000441080 CAMTA1Q9Y6Y1 1673 aa2.69□□□□□ -1.98
PFDN4-202ENST00000441080 PTPRTO14522 1441 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 IGHV1OR15-9A0A0B4J2B8 117 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 CCDC169A6NNP5 214 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 SMKR1H3BMG3 65 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 AP3B1O00203 1094 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 RRP8O43159 456 aaKnown RBP2.68□□□□□ -1.98
PFDN4-202ENST00000441080 CLDN11O75508 207 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 H6PDO95479 791 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 SERPINE2P07093 398 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 ZNF806P0C7X5 589 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 CT45A6P0DMU7 189 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 CT45A5P0DMU8 189 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 CT45A7P0DMV0 189 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 ZNF14P17017 642 aaPredicted RBP2.68□□□□□ -1.98
PFDN4-202ENST00000441080 U2AF2P26368 475 aaKnown RBP eCLIP2.68□□□□□ -1.98
PFDN4-202ENST00000441080 SLC11A1P49279 550 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 CDKN2DP55273 166 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 CDC20Q12834 499 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 PSMD5Q16401 504 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 PRSS8Q16651 343 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 HSP90AB3PQ58FF7 597 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 CT45A1Q5HYN5 189 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 AVPI1Q5T686 147 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 LRRC66Q68CR7 880 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 WDFY1Q8IWB7 410 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 CT45A3Q8NHU0 189 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 NUBPLQ8TB37 319 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 PTX4Q96A99 478 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 ZNF488Q96MN9 340 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 DOK1Q99704 481 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 RNF5Q99942 180 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 FAM192AQ9GZU8 254 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 ZNF160Q9HCG1 818 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 NUP214P35658 2090 aaPredicted RBP2.68□□□□□ -1.98
PFDN4-202ENST00000441080 TNS2Q63HR2 1409 aa2.68□□□□□ -1.98
PFDN4-202ENST00000441080 TRBV9A0A0B4J1U6 114 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 SCAMP2O15127 329 aaKnown RBP2.67□□□□□ -1.98
PFDN4-202ENST00000441080 RAD51CO43502 376 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 EIF4E2O60573 245 aaKnown RBP2.67□□□□□ -1.98
PFDN4-202ENST00000441080 ERLIN1O75477 346 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 CCNE2O96020 404 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 IGLV3-19P01714 112 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 HLA-DQA1P01909 254 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 KRT14P02533 472 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 OTX1P32242 354 aaPredicted RBP2.67□□□□□ -1.98
PFDN4-202ENST00000441080 CXCL12P48061 93 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 CRISP1P54107 249 aa2.67□□□□□ -1.98
PFDN4-202ENST00000441080 CACNG7P62955 275 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms