RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 OR5M8Q8NGP6 311 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 TRIM2Q9C040 744 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 EPHX3Q9H6B9 360 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 GLRX2Q9NS18 164 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 C19orf12Q9NSK7 152 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 ETV7Q9Y603 341 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 KIF26AQ9ULI4 1882 aaPredicted RBP10.59□□□□□ -0.71
SMPD4-209ENST00000439886 A0A087WV62 115 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 SOX1O00570 391 aaPredicted RBP10.59□□□□□ -0.71
SMPD4-209ENST00000439886 SNRNP200O75643 2136 aaKnown RBP10.59□□□□□ -0.71
SMPD4-209ENST00000439886 DIRAS3O95661 229 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 WNT11O96014 354 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 PRH1P02810 166 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 ARG1P05089 322 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 PNLIPRP2P54317 469 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 F2RL1P55085 397 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 MLF2Q15773 248 aaPredicted RBP10.59□□□□□ -0.71
SMPD4-209ENST00000439886 PRAMEF8Q5VWM4 474 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 PRAMEF7Q5VXH5 474 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 PLPP4Q5VZY2 271 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 TMPPEQ6ZT21 453 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 PRSS41Q7RTY9 318 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 CSNK1A1LQ8N752 337 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 ZNF563Q8TA94 476 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 CCDC74AQ96AQ1 378 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 SEMA6CQ9H3T2 930 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 NCOR1P1Q9H4R4 102 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 SFXN1Q9H9B4 322 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 ACKR4Q9NPB9 350 aa10.59□□□□□ -0.71
SMPD4-209ENST00000439886 MBNL1Q9NR56 388 aaKnown RBP10.59□□□□□ -0.71
SMPD4-209ENST00000439886 MRM2Q9UI43 246 aaKnown RBP10.59□□□□□ -0.71
SMPD4-209ENST00000439886 MRPS33Q9Y291 106 aaKnown RBP10.59□□□□□ -0.71
SMPD4-209ENST00000439886 SCN5AQ14524 2016 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 ABCD3P28288 659 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 RIPPLY1Q0D2K3 151 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 ERN2Q76MJ5 926 aaKnown RBP10.58□□□□□ -0.72
SMPD4-209ENST00000439886 TRAPPC6BQ86SZ2 158 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 OR52R1Q8NGF1 315 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 OR2G2Q8NGZ5 317 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 MARS2Q96GW9 593 aaKnown RBP10.58□□□□□ -0.72
SMPD4-209ENST00000439886 MRGPRX3Q96LB0 322 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 ZNF681Q96N22 645 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 CCDC3Q9BQI4 270 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 C2orf88Q9BSF0 95 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 SMCO4Q9NRQ5 59 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 TMEM74BQ9NUR3 256 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 RNF186Q9NXI6 227 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 DOCK9Q9BZ29 2069 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 RNF222A6NCQ9 220 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 SNRPCP09234 159 aaKnown RBP10.58□□□□□ -0.72
SMPD4-209ENST00000439886 VIPR2P41587 438 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 MEP1BQ16820 701 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 DMRTA1Q5VZB9 504 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 ANKRD16Q6P6B7 361 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 SLC39A5Q6ZMH5 540 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 MARCH3Q86UD3 253 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 FAM24BQ8N5W8 94 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 UBAC2Q8NBM4 344 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 ST7LQ8TDW4 575 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 SLC25A44Q96H78 314 aaPredicted RBP10.58□□□□□ -0.72
SMPD4-209ENST00000439886 SLC41A2Q96JW4 573 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 SRMSQ9H3Y6 488 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 RRAGCQ9HB90 399 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 CES1P1Q9UKY3 287 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 RPH3ALQ9UNE2 315 aa10.58□□□□□ -0.72
SMPD4-209ENST00000439886 FGF17O60258 216 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 LRP3O75074 770 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 STK17BO94768 372 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 GLCEO94923 617 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 PAX6P26367 422 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 PSMB6P28072 239 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 TNFRSF9Q07011 255 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 RUNX2Q13950 521 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 SURF2Q15527 256 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-209ENST00000439886 RNF151Q2KHN1 245 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 ALG10Q5BKT4 473 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 Q5PR19 223 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 SPNS3Q6ZMD2 512 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 CDRT4Q8N9R6 151 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 SECTM1Q8WVN6 248 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 NAA11Q9BSU3 229 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-209ENST00000439886 LAT2Q9GZY6 243 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 FN3KRPQ9HA64 309 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 KCNG2Q9UJ96 466 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-209ENST00000439886 COL4A4P53420 1690 aaPredicted RBP10.57□□□□□ -0.72
SMPD4-209ENST00000439886 HTTP42858 3142 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 MPDZO75970 2070 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 MDC1Q14676 2089 aaKnown RBP10.57□□□□□ -0.72
SMPD4-209ENST00000439886 A0A1W2PPH5 198 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 METTL12A8MUP2 240 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 PRRT4C9JH25 899 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 DCTN6O00399 190 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 XKRYO14609 159 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 ADAP1O75689 374 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 ZNF101Q8IZC7 436 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 NPEPL1Q8NDH3 523 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 OR5AP2Q8NGF4 316 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 OR13C9Q8NGT0 318 aa10.57□□□□□ -0.72
SMPD4-209ENST00000439886 FAM174AQ8TBP5 190 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms