RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SPATA46Q5T0L3 261 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 OTPQ5XKR4 325 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 CD300LDQ6UXZ3 194 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 LNX2Q8N448 690 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 SLC26A10Q8NG04 563 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 OR8D4Q8NGM9 314 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 OR1F12Q8NHA8 337 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 KLF14Q8TD94 323 aaPredicted RBP21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 COG8Q96MW5 612 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 OR2J1Q9GZK6 312 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 HDHD2Q9H0R4 259 aa21.16■□□□□ 0.98
RAPGEF1-206ENST00000438647 TCRBV3S1A0A5B6 114 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 OR6C6A6NF89 314 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 INAFM1C9JVW0 142 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 RER1O15258 196 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 E2F6O75461 281 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 GPANK1O95872 356 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 HLA-DQA2P01906 255 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 MRPS11P82912 194 aaKnown RBP21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 TEKQ02763 1124 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 MEP1BQ16820 701 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 OR2T4Q8NH00 348 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 IPCEF1Q8WWN9 437 aaPredicted RBP21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 RDH5Q92781 318 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 DCLRE1CQ96SD1 692 aaKnown RBP21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 CDADC1Q9BWV3 514 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 CADM1Q9BY67 442 aaKnown RBP21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 NKIRAS2Q9NYR9 191 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 CGGBP1Q9UFW8 167 aaPredicted RBP21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 KLHL21Q9UJP4 597 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 LHFPL6Q9Y693 200 aa21.15■□□□□ 0.98
RAPGEF1-206ENST00000438647 PLSCR5A0PG75 271 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 SOX14O95416 240 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 NGFP01138 241 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 HPXP02790 462 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 LIPAP38571 399 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 CCDC92Q53HC0 331 aaPredicted RBP21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 PROKR2Q8NFJ6 384 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 TEX47Q8TBZ9 253 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 FEVQ99581 238 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 COQ7Q99807 217 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 FN3KQ9H479 309 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 CHODLQ9H9P2 273 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 CYSLTR2Q9NS75 346 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 KCNG2Q9UJ96 466 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 GRIP1Q9Y3R0 1128 aa21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 CHD3Q12873 2000 aaKnown RBP21.14■□□□□ 0.97
RAPGEF1-206ENST00000438647 NAV3Q8IVL0 2385 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 J3QW42 95 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 FKBP6O75344 327 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 IFNGP01579 166 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 TFP02787 698 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 ACHEP22303 614 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 MPV17P39210 176 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 RGS6P49758 472 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 GZMKP49863 264 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 HIST1H3AP68431 136 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 CBX1P83916 185 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 RIN1Q13671 783 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 ELFN2Q5R3F8 820 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 HIST2H3PS2Q5TEC6 136 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 HIST2H3AQ71DI3 136 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 CYB561A3Q8NBI2 242 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 OR2AJ1Q8NGZ0 328 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 NIPSNAP1Q9BPW8 284 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 MMADHCQ9H3L0 296 aaPredicted RBP21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 ARMC1Q9NVT9 282 aa21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 PDP1Q9P0J1 537 aaPredicted RBP21.13■□□□□ 0.97
RAPGEF1-206ENST00000438647 IGHV4-61A0A0C4DH41 118 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 H3BN98 237 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 ZNF823P16415 610 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 ZNF23P17027 643 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 ZNF81P51508 661 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 KRTAP21-3Q3LHN1 58 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 ZMAT1Q5H9K5 638 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 CYB5R2Q6BCY4 276 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 SLC37A3Q8NCC5 494 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 PAPD5Q8NDF8 572 aaKnown RBP21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 DDOQ99489 341 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 ZNF556Q9HAH1 456 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 YAE1D1Q9NRH1 226 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 DNAJB9Q9UBS3 223 aa21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 ANK3Q12955 4377 aaKnown RBP21.12■□□□□ 0.97
RAPGEF1-206ENST00000438647 LYNX1G3V0Z9 82 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 NCR1O76036 304 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 LYNX1P0DP58 116 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 MAGEB1P43366 347 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 ECH1Q13011 328 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 FAM209AQ5JX71 171 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 ZNF362Q5T0B9 420 aaPredicted RBP21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 C6orf52Q5T4I8 152 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 SLC18B1Q6NT16 456 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 CORO6Q6QEF8 472 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 OR5L1Q8NGL2 311 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 OR4Q3Q8NH05 313 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 SLC7A6Q92536 515 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 DECR2Q9NUI1 292 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 CYB5R1Q9UHQ9 305 aa21.11■□□□□ 0.97
RAPGEF1-206ENST00000438647 RIIAD1A6NNX1 92 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms