RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 STARP49675 285 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 CLDN18P56856 261 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 PSMA6P60900 246 aaKnown RBP13.6□□□□□ -0.23
SGCE-205ENST00000437425 CLN3Q13286 438 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 NRN1LQ496H8 165 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 PYDC2Q56P42 97 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 ATP1A1-AS1Q5TC04 95 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 GPR137CQ8N3F9 429 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 POC5Q8NA72 575 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 ZNF671Q8TAW3 534 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 SDHCQ99643 169 aaPredicted RBP13.6□□□□□ -0.23
SGCE-205ENST00000437425 HES7Q9BYE0 225 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 G6PC2Q9NQR9 355 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 DDX28Q9NUL7 540 aaKnown RBP13.6□□□□□ -0.23
SGCE-205ENST00000437425 CDV3Q9UKY7 258 aaKnown RBP13.6□□□□□ -0.23
SGCE-205ENST00000437425 AK6Q9Y3D8 172 aaKnown RBP13.6□□□□□ -0.23
SGCE-205ENST00000437425 ETV7Q9Y603 341 aa13.6□□□□□ -0.23
SGCE-205ENST00000437425 ANXA2P2A6NMY6 339 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 FAM166BA8MTA8 275 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 TPPPO94811 219 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 ANXA2P07355 339 aaKnown RBP13.59□□□□□ -0.23
SGCE-205ENST00000437425 FREM3P0C091 2139 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 FSTP19883 344 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 SELENOPP49908 381 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 PITPNAQ00169 270 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 IL18Q14116 193 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 RNPS1Q15287 305 aaKnown RBP13.59□□□□□ -0.23
SGCE-205ENST00000437425 SGCAQ16586 387 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 FAM27BQ5VT28 67 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 HACD4Q5VWC8 232 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 CORO6Q6QEF8 472 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 SPATC1Q76KD6 591 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 CHMP1BQ7LBR1 199 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 ELMOD2Q8IZ81 293 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 SAMD12Q8N8I0 201 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 RBM24Q9BX46 236 aaKnown RBP13.59□□□□□ -0.23
SGCE-205ENST00000437425 PPP1R3EQ9H7J1 279 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 EMC7Q9NPA0 242 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 BRD7Q9NPI1 651 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 FAM206AQ9NX38 181 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 ASH2LQ9UBL3 628 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 NUFIP1Q9UHK0 495 aaKnown RBP13.59□□□□□ -0.23
SGCE-205ENST00000437425 KIAA1549Q9HCM3 1950 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 TRAV17A0A0B4J275 112 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 ZNF724A8MTY0 619 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 H0YC42 278 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 CEACAM4O75871 244 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 IL7P13232 177 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 CPN1P15169 458 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 ATF1P18846 271 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 ELK1P19419 428 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 SDHBP21912 280 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 CDAP32320 146 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 SOX2P48431 317 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 CCL11P51671 97 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 CAPZA1P52907 286 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 HIST1H3AP68431 136 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 MFGE8Q08431 387 aaPredicted RBP13.59□□□□□ -0.23
SGCE-205ENST00000437425 SLC25A35Q3KQZ1 300 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 UBE2NLQ5JXB2 153 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 HIST2H3PS2Q5TEC6 136 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 PYHIN1Q6K0P9 492 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 HIST2H3AQ71DI3 136 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.59□□□□□ -0.23
SGCE-205ENST00000437425 SYT9Q86SS6 491 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 CCDC54Q8NEL0 328 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 C15orf40Q8WUR7 153 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 ASB5Q8WWX0 329 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 ROBO4Q8WZ75 1007 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 KCNJ15Q99712 375 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 LINC00470Q9BZP3 86 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 ZDHHC11Q9H8X9 412 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 GP6Q9HCN6 339 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 EXTL2Q9UBQ6 330 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 SLC22A13Q9Y226 551 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 ALPK2Q86TB3 2170 aa13.59□□□□□ -0.23
SGCE-205ENST00000437425 RIF1Q5UIP0 2472 aaKnown RBP13.58□□□□□ -0.23
SGCE-205ENST00000437425 A0A1B0GTH9 108 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 HLA-DQB1P01920 261 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 CST2P09228 141 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 PITPNBP48739 271 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 ECH1Q13011 328 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 OTPQ5XKR4 325 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 CFAP77Q6ZQR2 320 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 LRRTM1Q86UE6 522 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 ZNF433Q8N7K0 673 aaPredicted RBP13.58□□□□□ -0.24
SGCE-205ENST00000437425 FDCSPQ8NFU4 85 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 RAB40AQ8WXH6 277 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 NABP1Q96AH0 204 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 ZNF416Q9BWM5 594 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 SLC6A15Q9H2J7 730 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 LDAHQ9H6V9 325 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 FBXL3Q9UKT7 428 aa13.58□□□□□ -0.24
SGCE-205ENST00000437425 TRGV5A0A0B4J1U4 118 aa13.57□□□□□ -0.24
SGCE-205ENST00000437425 PFDN1O60925 122 aa13.57□□□□□ -0.24
SGCE-205ENST00000437425 MRPL33O75394 65 aaKnown RBP13.57□□□□□ -0.24
SGCE-205ENST00000437425 SLC2A2P11168 524 aaPredicted RBP13.57□□□□□ -0.24
SGCE-205ENST00000437425 PCBD1P61457 104 aa13.57□□□□□ -0.24
SGCE-205ENST00000437425 TRIQKQ629K1 86 aa13.57□□□□□ -0.24
SGCE-205ENST00000437425 GLT8D1Q68CQ7 371 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms