RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 CD163Q86VB7 1156 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF100Q8IYN0 542 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF679Q8IYX0 411 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 YIPF7Q8N8F6 280 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 C9orf106Q8NAJ2 232 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 ST7LQ8TDW4 575 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 HTRA1Q92743 480 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 WNT2BQ93097 391 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 C1orf198Q9H425 327 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 CRLF2Q9HC73 371 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 SLC7A10Q9NS82 523 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 TMEM38BQ9NVV0 291 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 SLCO1C1Q9NYB5 712 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 ST6GALNAC2Q9UJ37 374 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 GDF2Q9UK05 429 aaPredicted RBP9.91□□□□□ -0.82
LINC00539-203ENST00000434601 STUB1Q9UNE7 303 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 MEMO1Q9Y316 297 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 GRIP1Q9Y3R0 1128 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 LHFPL6Q9Y693 200 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 ALPK2Q86TB3 2170 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 INTS1Q8N201 2190 aaKnown RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 MBD3L4A6NDZ8 208 aaPredicted RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 MBD3L3A6NE82 208 aaPredicted RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 MBD3L5A6NJ08 208 aaPredicted RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF587BE7ETH6 402 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 E9PI62 339 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 SLC22A1O15245 554 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 IGHV3-9P01782 118 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 ABOP16442 354 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 NPR2P20594 1047 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 PSMA1P25786 263 aaKnown RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 PSMB10P40306 273 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 OR3A2P47893 321 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 TGM4P49221 684 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 RIDAP52758 137 aaKnown RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 RPS25P62851 125 aaKnown RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 ADORA2A-AS1P86434 159 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 AQP6Q13520 282 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 GPR50Q13585 617 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 ENDOGQ14249 297 aaKnown RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 CDK5R1Q15078 307 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 GUSBP1Q15486 140 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 CCDC58Q4VC31 144 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 C1orf185Q5T7R7 199 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 LIPNQ5VXI9 398 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 RPL22L1Q6P5R6 122 aaKnown RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 CORO6Q6QEF8 472 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 ARL9Q6T311 187 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 LRRN1Q6UXK5 716 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 CFAP77Q6ZQR2 320 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 KRT77Q7Z794 578 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 OR2AJ1Q8NGZ0 328 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 MBD3L2Q8NHZ7 208 aaPredicted RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 FAM57AQ8TBR7 257 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 RPL3LQ92901 407 aaKnown RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 SMIM19Q96E16 107 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF837Q96EG3 531 aaPredicted RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 TM9SF2Q99805 663 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 FOXB1Q99853 325 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 MROQ9BYG7 248 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 OR51E2Q9H255 320 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 C12orf49Q9H741 205 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 ELOVL3Q9HB03 270 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 ASH2LQ9UBL3 628 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 UPB1Q9UBR1 384 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 TINAGQ9UJW2 476 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 SF3B6Q9Y3B4 125 aaKnown RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 EMC9Q9Y3B6 208 aa9.9□□□□□ -0.82
LINC00539-203ENST00000434601 SIRT4Q9Y6E7 314 aaPredicted RBP9.9□□□□□ -0.82
LINC00539-203ENST00000434601 ARHGAP21Q5T5U3 1957 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 LOC100506127A0A0U1RQW1 187 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 RPL36A-HNRNPH2H7BZ11 118 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 PRRG2O14669 202 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 OGG1O15527 345 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 PLPP2O43688 288 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 ZNF254O75437 659 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 RPP14O95059 124 aaKnown RBP9.89□□□□□ -0.83
LINC00539-203ENST00000434601 ATE1O95260 518 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 CD53P19397 219 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 GDI2P50395 445 aaKnown RBP9.89□□□□□ -0.83
LINC00539-203ENST00000434601 NCS1P62166 190 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 LSM3P62310 102 aaKnown RBP9.89□□□□□ -0.83
LINC00539-203ENST00000434601 SIRPAP78324 504 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 NRN1LQ496H8 165 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 FAM27BQ5VT28 67 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 DMKNQ6E0U4 476 aaPredicted RBP9.89□□□□□ -0.83
LINC00539-203ENST00000434601 OR7E24Q6IFN5 339 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 DEGS2Q6QHC5 323 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 SPATC1Q76KD6 591 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 FAM214BQ7L5A3 538 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 ABHD12BQ7Z5M8 362 aaPredicted RBP9.89□□□□□ -0.83
LINC00539-203ENST00000434601 GCNT2Q8N0V5 402 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 OR6K3Q8NGY3 331 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 RPS4Y2Q8TD47 263 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 RNF133Q8WVZ7 376 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 SLAMF6Q96DU3 332 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 C14orf79Q96F83 325 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 MAP6Q96JE9 813 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 SPOCK3Q9BQ16 436 aa9.89□□□□□ -0.83
LINC00539-203ENST00000434601 CHCHD6Q9BRQ6 235 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms