RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 P2RY10O00398 339 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 B3GALNT1O75752 331 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 NXPH1P58417 271 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 RNF4P78317 190 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 POU3F1Q03052 451 aaPredicted RBP10.56□□□□□ -0.72
CD44-209ENST00000433892 SCGB2B2Q4G0G5 96 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 GSG1LQ6UXU4 331 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 C17orf107Q6ZR85 190 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 ACBD4Q8NC06 268 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 OR4S1Q8NGB4 309 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 ASB10Q8WXI3 467 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 LINC00052Q96N35 136 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 ALX4Q9H161 411 aaPredicted RBP10.56□□□□□ -0.72
CD44-209ENST00000433892 C1orf198Q9H425 327 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 FGF21Q9NSA1 209 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 UPB1Q9UBR1 384 aa10.56□□□□□ -0.72
CD44-209ENST00000433892 ZNF230Q9UIE0 474 aaPredicted RBP10.56□□□□□ -0.72
CD44-209ENST00000433892 ARPC4-TTLL3A0A0A6YYG9 625 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 ZNF736B4DX44 427 aaPredicted RBP10.55□□□□□ -0.72
CD44-209ENST00000433892 SHISA8B8ZZ34 492 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 LDLRAD4O15165 306 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 DUX1O43812 170 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 PMS2P2O95744 297 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 PTGS2P35354 604 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 EIF1AXP47813 144 aaKnown RBP10.55□□□□□ -0.72
CD44-209ENST00000433892 TDGQ13569 410 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 MPPED2Q15777 294 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 ARSKQ6UWY0 536 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.55□□□□□ -0.72
CD44-209ENST00000433892 C12orf45Q8N5I9 185 aaPredicted RBP10.55□□□□□ -0.72
CD44-209ENST00000433892 OR1J2Q8NGS2 313 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 SCARB1Q8WTV0 552 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 CCDC107Q8WV48 283 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 TMEM234Q8WY98 164 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 MFFQ9GZY8 342 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 KLK13Q9UKR3 277 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 FBXO4Q9UKT5 387 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 CA14Q9ULX7 337 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 COL5A1P20908 1838 aaPredicted RBP10.55□□□□□ -0.72
CD44-209ENST00000433892 MEGF11A6BM72 1044 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 A6NIZ1 184 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 H3BML4 177 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 H3BUI4 141 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 PIAS2O75928 621 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 ISG15P05161 165 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 CD37P11049 281 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 LIPCP11150 499 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 ACHEP22303 614 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 RAP1BP61224 184 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 RAP1AP62834 184 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 TLE3Q04726 772 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 GK2Q14410 553 aaPredicted RBP10.55□□□□□ -0.72
CD44-209ENST00000433892 NKPD1Q17RQ9 610 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 LY6G6FQ5SQ64 297 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 ATPAF1Q5TC12 328 aaPredicted RBP10.55□□□□□ -0.72
CD44-209ENST00000433892 H1FNTQ75WM6 255 aaPredicted RBP10.55□□□□□ -0.72
CD44-209ENST00000433892 BPIFB2Q8N4F0 458 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 FGGYQ96C11 551 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 CMBLQ96DG6 245 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 DMRTA2Q96SC8 542 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 KCNK17Q96T54 332 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 SLC6A7Q99884 636 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 SLC25A21Q9BQT8 299 aaPredicted RBP10.55□□□□□ -0.72
CD44-209ENST00000433892 EMC6Q9BV81 110 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 TTYH1Q9H313 450 aaPredicted RBP10.55□□□□□ -0.72
CD44-209ENST00000433892 SCPEP1Q9HB40 452 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 SLC22A11Q9NSA0 550 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 FBXL2Q9UKC9 423 aa10.55□□□□□ -0.72
CD44-209ENST00000433892 DMDP11532 3685 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 LOC100509620A0A075B734 347 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 SPDEFO95238 335 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 MELTFP08582 738 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 H2BFMP0C1H6 154 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 ZNF735P0CB33 412 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 DAP3P51398 398 aaKnown RBP10.54□□□□□ -0.72
CD44-209ENST00000433892 HSF1Q00613 529 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 RIPPLY1Q0D2K3 151 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 ZNF660Q6AZW8 331 aaPredicted RBP10.54□□□□□ -0.72
CD44-209ENST00000433892 DNM1P34Q6PK57 102 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 ZNF704Q6ZNC4 412 aaPredicted RBP10.54□□□□□ -0.72
CD44-209ENST00000433892 CD163Q86VB7 1156 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 STEAP2Q8NFT2 490 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 FAM46BQ96A09 425 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 ZNF501Q96CX3 271 aaPredicted RBP10.54□□□□□ -0.72
CD44-209ENST00000433892 CNTD2Q9H8S5 307 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 ATXN7L1Q9ULK2 861 aaPredicted RBP10.54□□□□□ -0.72
CD44-209ENST00000433892 TRAV14DV4A0A0A6YYC5 116 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 WIPF3A6NGB9 483 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 LGALS8O00214 317 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 NUDT21O43809 227 aaKnown RBP10.54□□□□□ -0.72
CD44-209ENST00000433892 GNALP38405 381 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 DHRS2Q13268 280 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 PCK2Q16822 640 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 TUSC1Q2TAM9 212 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 C1orf100Q5SVJ3 147 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 PXDC1Q5TGL8 231 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 TMEM244Q5VVB8 128 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 PAPD4Q6PIY7 484 aaKnown RBP10.54□□□□□ -0.72
CD44-209ENST00000433892 C5orf46Q6UWT4 87 aa10.54□□□□□ -0.72
CD44-209ENST00000433892 PRSS42Q7Z5A4 293 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms