RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 GJE1A6NN92 205 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 TRIM49D1C9J1S8 452 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 C9JVG2 144 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 TRAF3IP2O43734 574 aaPredicted RBP3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 EIF3GO75821 320 aaKnown RBP eCLIP3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 RBMY1DP0C7P1 496 aaKnown RBP3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 RBMY1A1P0DJD3 496 aaKnown RBP3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SMIM10L1P0DMW3 83 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 IGHV3-43DP0DP04 118 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 NR2C1P13056 603 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 HPGDP15428 266 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ABOP16442 354 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ZNF17P17021 662 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 TNNI1P19237 187 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 NUDT1P36639 197 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SSR4P51571 173 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ACLYP53396 1101 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SUB1P53999 127 aaKnown RBP eCLIP3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ENPEPQ07075 957 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 CUL2Q13617 745 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SASS6Q6UVJ0 657 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 CAMK2N1Q7Z7J9 78 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 FAM71E2Q8N5Q1 922 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 MS4A15Q8N5U1 240 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 DCAF4L2Q8NA75 395 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 OR52K2Q8NGK3 314 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 OR2G3Q8NGZ4 309 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 NDRG1Q92597 394 aaKnown RBP3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 SMIM10Q96HG1 83 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 OR2M2Q96R28 347 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 RASL11BQ9BPW5 248 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 VPS37BQ9H9H4 285 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 INPP5EQ9NRR6 644 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 ZNF225Q9UK10 706 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 TP53TG5Q9Y2B4 290 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 F8P00451 2351 aa3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 USP9YO00507 2555 aaPredicted RBP3.47□□□□□ -1.85
PTP4A1P3-201ENST00000433661 AHCTF1Q8WYP5 2266 aa3.46□□□□□ -1.85
PTP4A1P3-201ENST00000433661 A0A0B4J2A0 478 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 NKX2-6A6NCS4 301 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 SGK1O00141 431 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 ERLIN2O94905 339 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 PABPC4LP0CB38 370 aaKnown RBP3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 CHMLP26374 656 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 NSG1P42857 185 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 CDH6P55285 790 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 SH3BGRP55822 239 aaPredicted RBP3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 IRX3P78415 501 aaPredicted RBP3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 MPPED2Q15777 294 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 ZNF630Q2M218 657 aaPredicted RBP3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 LRRC10Q5BKY1 277 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 PRAMEF20Q5VT98 475 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 OR4F15Q8NGB8 312 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 ACMSDQ8TDX5 336 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 MCUR1Q96AQ8 359 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 LRRC58Q96CX6 371 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 CHP1Q99653 195 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 ECSITQ9BQ95 431 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 NEK6Q9HC98 313 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 RPS6KB2Q9UBS0 482 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 SHPKQ9UHJ6 478 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 NUFIP1Q9UHK0 495 aaKnown RBP3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 PACSIN2Q9UNF0 486 aaPredicted RBP3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 TSC2P49815 1807 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 SPTBN1Q01082 2364 aaKnown RBP3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 SVILO95425 2214 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 CABIN1Q9Y6J0 2220 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 LOC285556D6RIA3 1793 aa3.46□□□□□ -1.86
PTP4A1P3-201ENST00000433661 UBN2Q6ZU65 1347 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 URB1O60287 2271 aaKnown RBP3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 ZNF726A6NNF4 738 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 H0Y9J4 135 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 GOSR2O14653 212 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 INSP01308 110 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 GKN3PP0CG01 181 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 AK4P27144 223 aaPredicted RBP3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 ATP5C1P36542 298 aaKnown RBP3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 CSNK1DP48730 415 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 CCNHP51946 323 aaPredicted RBP3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 ZNF92Q03936 586 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 PDIA2Q13087 525 aaKnown RBP3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 TGFBIQ15582 683 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 SGCAQ16586 387 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 TCEAL5Q5H9L2 206 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 SPANXN2Q5MJ10 180 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 FRMPD2BQ6IN97 320 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 TMEM61Q8N0U2 210 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 RNF175Q8N4F7 328 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 FBXL13Q8NEE6 735 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 MCOLN3Q8TDD5 553 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 ANP32BQ92688 251 aaKnown RBP3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 CELA1Q9UNI1 258 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 APC2O95996 2303 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 NOTCH1P46531 2555 aa3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 UTP20O75691 2785 aaKnown RBP3.45□□□□□ -1.86
PTP4A1P3-201ENST00000433661 SYNRGQ9UMZ2 1314 aa3.44□□□□□ -1.86
PTP4A1P3-201ENST00000433661 MAPK8IP3Q9UPT6 1336 aa3.44□□□□□ -1.86
PTP4A1P3-201ENST00000433661 ZNF236Q9UL36 1845 aa3.44□□□□□ -1.86
PTP4A1P3-201ENST00000433661 A0A075B6Q4 140 aa3.44□□□□□ -1.86
PTP4A1P3-201ENST00000433661 A0A1B0GUA9 196 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms