RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 LINC01006Q8NI28 216 aa18.41■□□□□ 0.54
PTPRA-207ENST00000431048 SSMEM1Q8WWF3 244 aa18.41■□□□□ 0.54
PTPRA-207ENST00000431048 OR8B2Q96RD0 313 aa18.41■□□□□ 0.54
PTPRA-207ENST00000431048 USH1CQ9Y6N9 552 aa18.41■□□□□ 0.54
PTPRA-207ENST00000431048 THRBP10828 461 aa18.4■□□□□ 0.54
PTPRA-207ENST00000431048 RAC2P15153 192 aa18.4■□□□□ 0.54
PTPRA-207ENST00000431048 MSR1P21757 451 aa18.4■□□□□ 0.54
PTPRA-207ENST00000431048 PITPNBP48739 271 aa18.4■□□□□ 0.54
PTPRA-207ENST00000431048 SLC18A1P54219 525 aa18.4■□□□□ 0.54
PTPRA-207ENST00000431048 ZNF404Q494X3 552 aa18.4■□□□□ 0.54
PTPRA-207ENST00000431048 TTMPQ5BVD1 217 aa18.4■□□□□ 0.54
PTPRA-207ENST00000431048 NLRC3Q7RTR2 1065 aa18.4■□□□□ 0.54
PTPRA-207ENST00000431048 MEGF10Q96KG7 1140 aa18.4■□□□□ 0.54
PTPRA-207ENST00000431048 C20orf141Q9NUB4 165 aa18.4■□□□□ 0.54
PTPRA-207ENST00000431048 TMEM120BA0PK00 339 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 RPL27P61353 136 aaKnown RBP18.39■□□□□ 0.53
PTPRA-207ENST00000431048 GUCY1A3Q02108 690 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 CROCCP2Q86T23 111 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 C1QL4Q86Z23 238 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 NKAIN4Q8IVV8 208 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 ATG16L2Q8NAA4 619 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 ZNF420Q8TAQ5 688 aaPredicted RBP18.39■□□□□ 0.53
PTPRA-207ENST00000431048 TBC1D15Q8TC07 691 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 TMEM239Q8WW34 195 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 TAMM41Q96BW9 452 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 POLR2J2Q9GZM3 115 aaKnown RBP18.39■□□□□ 0.53
PTPRA-207ENST00000431048 POLR2J3Q9H1A7 115 aaKnown RBP18.39■□□□□ 0.53
PTPRA-207ENST00000431048 ASH2LQ9UBL3 628 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 CLN8Q9UBY8 286 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 HIF3AQ9Y2N7 669 aa18.39■□□□□ 0.53
PTPRA-207ENST00000431048 P2RY10O00398 339 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 PHYHO14832 338 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 ZNF205O95201 554 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 CYB5R3P00387 301 aaPredicted RBP18.38■□□□□ 0.53
PTPRA-207ENST00000431048 SRP9P49458 86 aaKnown RBP18.38■□□□□ 0.53
PTPRA-207ENST00000431048 CYP51A1Q16850 503 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 ALG10Q5BKT4 473 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 WDR25Q64LD2 544 aaPredicted RBP18.38■□□□□ 0.53
PTPRA-207ENST00000431048 ZNF841Q6ZN19 808 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 OR13G1Q8NGZ3 307 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 TMEM255BQ8WV15 326 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 RASSF5Q8WWW0 418 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 TCF7L1Q9HCS4 588 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 POLE4Q9NR33 117 aa18.38■□□□□ 0.53
PTPRA-207ENST00000431048 NBEAL2Q6ZNJ1 2754 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 HTR3EA5X5Y0 456 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 LRRC30A6NM36 301 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 J3QW42 95 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 POLR3GO15318 223 aaPredicted RBP18.37■□□□□ 0.53
PTPRA-207ENST00000431048 ENSAO43768 121 aaKnown RBP18.37■□□□□ 0.53
PTPRA-207ENST00000431048 ALX3O95076 343 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 TSPAN15O95858 294 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 SCG5P05408 212 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 ERFP50548 548 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 SCRN3Q0VDG4 424 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 C1orf87Q8N0U7 546 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 CLDN22Q8N7P3 220 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 PCYOX1LQ8NBM8 494 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 OR8G5Q8NG78 346 aa18.37■□□□□ 0.53
PTPRA-207ENST00000431048 A0A1W2PPL8 197 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 OR5F1O95221 314 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 LIPFP07098 398 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 HTR5AP47898 357 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 INTS11Q5TA45 600 aaKnown RBP18.36■□□□□ 0.53
PTPRA-207ENST00000431048 RUSC1-AS1Q66K80 236 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 FBXW12Q6X9E4 464 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 DCDC5Q6ZRR9 648 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 SLC26A7Q8TE54 656 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 CCDC28BQ9BUN5 200 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 CDADC1Q9BWV3 514 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 KIF17Q9P2E2 1029 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 RIMS3Q9UJD0 308 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 MED31Q9Y3C7 131 aa18.36■□□□□ 0.53
PTPRA-207ENST00000431048 CENPVL3A0A0U1RRI6 287 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 C5orf63A6NC05 138 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 A6NIZ1 184 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 SGCEO43556 437 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 GPR137BO60478 399 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 DOK2O60496 412 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 CFHR2P36980 270 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 RAP1BP61224 184 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 RAP1AP62834 184 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 TOP3AQ13472 1001 aaPredicted RBP18.35■□□□□ 0.53
PTPRA-207ENST00000431048 AGKQ53H12 422 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 CCDC80Q76M96 950 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 VASH1Q7L8A9 365 aaPredicted RBP18.35■□□□□ 0.53
PTPRA-207ENST00000431048 ZSCAN4Q8NAM6 433 aaPredicted RBP18.35■□□□□ 0.53
PTPRA-207ENST00000431048 LRRC8CQ8TDW0 803 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 GATAD2BQ8WXI9 593 aa18.35■□□□□ 0.53
PTPRA-207ENST00000431048 KAT8Q9H7Z6 458 aaKnown RBP18.35■□□□□ 0.53
PTPRA-207ENST00000431048 KMT2CQ8NEZ4 4911 aaKnown RBP18.34■□□□□ 0.53
PTPRA-207ENST00000431048 A0A1B0GWJ7 208 aa18.34■□□□□ 0.53
PTPRA-207ENST00000431048 ZNF879B4DU55 563 aa18.34■□□□□ 0.53
PTPRA-207ENST00000431048 C22orf46C9J442 243 aa18.34■□□□□ 0.53
PTPRA-207ENST00000431048 MMP9P14780 707 aa18.34■□□□□ 0.53
PTPRA-207ENST00000431048 PSMB10P40306 273 aa18.34■□□□□ 0.53
PTPRA-207ENST00000431048 PMELP40967 661 aa18.34■□□□□ 0.53
PTPRA-207ENST00000431048 IDH3AP50213 366 aa18.34■□□□□ 0.53
PTPRA-207ENST00000431048 NPY4RP50391 375 aa18.34■□□□□ 0.53
PTPRA-207ENST00000431048 CRYBA2P53672 197 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms