RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 TMEM100Q9NV29 134 aa15.41■□□□□ 0.06
SMARCA4-203ENST00000429416 A0A1W2PQM1 296 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 PPIHO43447 177 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 APEHP13798 732 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 KDM4DQ6B0I6 523 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 SLC6A13Q9NSD5 602 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 ANKRD61A6NGH8 418 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 TUBAL3A6NHL2 446 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 SP1P08047 785 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 CDC20Q12834 499 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 ZNF74Q16587 644 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 NKX3-1Q99801 234 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 CEACAM1P13688 526 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 KIAA0040Q15053 153 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 OR51D1Q8NGF3 324 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 ZNF681Q96N22 645 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 UBTD1Q9HAC8 227 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 A0A1W2PS29 197 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 FOXS1O43638 330 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 CNIH1O95406 144 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 CD3EP07766 207 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 ATP1A1-AS1Q5TC04 95 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 PAQR6Q6TCH4 344 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 RDH10Q8IZV5 341 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 PRRT1Q99946 306 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 CLEC2DQ9UHP7 191 aa15.4■□□□□ 0.06
SMARCA4-203ENST00000429416 A0A1B0GTH9 108 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 ZNF254O75437 659 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 LIFP15018 202 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 CXorf67Q86X51 503 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 OPALINQ96PE5 141 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 GAAP10253 952 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 RPA2P15927 270 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 TNFRSF1AP19438 455 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 PMP22Q01453 160 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 ZNF573Q86YE8 665 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 TDRD6O60522 2096 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 SLC22A23A1A5C7 686 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 ACHEP22303 614 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 CASP3P42574 277 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 PHC1P78364 1004 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 MEF2DQ14814 521 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 OR5M11Q96RB7 305 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 SDHAF2Q9NX18 166 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 HLA-HP01893 362 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 PCSK6P29122 969 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 CSF2RBP32927 897 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 TAS2R46P59540 309 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 MCCD1P59942 119 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 GPR155Q7Z3F1 870 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 OR2M7Q8NG81 312 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 RHOXF1Q8NHV9 184 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 PPA2Q9H2U2 334 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 FKBP14Q9NWM8 211 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 DNAJB12Q9NXW2 375 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 B9D1Q9UPM9 204 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 A0A1W2PR77 199 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 OGFOD3Q6PK18 319 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 ZFAND1Q8TCF1 268 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 PLAC1Q9HBJ0 212 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 MMP25Q9NPA2 562 aa15.39■□□□□ 0.05
SMARCA4-203ENST00000429416 MEIKINA0A087WXM9 373 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 TCRBV16S1A1N1A0A5B0 115 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 SH2D1BO14796 132 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 CELA2AP08217 269 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 RAB40ALP0C0E4 278 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 LSRQ86X29 649 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 ZDHHC23Q8IYP9 409 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 PTPMT1Q8WUK0 201 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 RAB40AQ8WXH6 277 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 THAP7Q9BT49 309 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 RAB27BO00194 218 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 OPRM1P35372 400 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 SRP14P37108 136 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 HAAOP46952 286 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 GALEQ14376 348 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.38■□□□□ 0.056e-8■■■■■ 50.8
SMARCA4-203ENST00000429416 GPR157Q5UAW9 335 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 BBS1Q8NFJ9 593 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 LGALS14Q8TCE9 139 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 TRMT61AQ96FX7 289 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 SCNM1Q9BWG6 230 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 TREM1Q9NP99 234 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 TAS2R4Q9NYW5 299 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 RNF212BA8MTL3 300 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 H7C1Q1 480 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 CDX4O14627 284 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 YES1P07947 543 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 ZNF679Q8IYX0 411 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 BPIFB2Q8N4F0 458 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 NKAIN3Q8N8D7 197 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 OR10X1Q8NGY0 326 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 CCL17Q92583 94 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 TNFSF12O43508 249 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 MRPS10P82664 201 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 PMPCAQ10713 525 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 FAM83FQ8NEG4 500 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 IL17BQ9UHF5 180 aa15.38■□□□□ 0.05
SMARCA4-203ENST00000429416 RPP30P78346 268 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms