RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 IGHV5-51A0A0C4DH38 117 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 TMEM82A0PJX8 343 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 SEC14L5O43304 696 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 PGCP20142 388 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 CD34P28906 385 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 SFTPDP35247 375 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 GUCA1AP43080 201 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 SLC6A9P48067 706 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 SEC61A1P61619 476 aaKnown RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 RPS11P62280 158 aaKnown RBP eCLIP7.28□□□□□ -1.24
HPS4-205ENST00000429411 MGAT2Q10469 447 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 CHAF1BQ13112 559 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 GK2Q14410 553 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 TCEAL6Q6IPX3 200 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 TMUB2Q71RG4 321 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 C12orf45Q8N5I9 185 aaPredicted RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 OR2I1PQ8NGU4 316 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 CCDC107Q8WV48 283 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 TCEAL3Q969E4 200 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 MIB2Q96AX9 1013 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 LINC00052Q96N35 136 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 TSPAN32Q96QS1 320 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 USB1Q9BQ65 265 aaKnown RBP7.28□□□□□ -1.24
HPS4-205ENST00000429411 SCML1Q9UN30 329 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 RNF24Q9Y225 148 aa7.28□□□□□ -1.24
HPS4-205ENST00000429411 PIEZO2Q9H5I5 2752 aa7.27□□□□□ -1.24
HPS4-205ENST00000429411 J3QRE1 110 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 HCKP08631 526 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 CSF1P09603 554 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 CXCL2P19875 107 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 PI3P19957 117 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 HSD11B1P28845 292 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 CSNK1EP49674 416 aaKnown RBP7.27□□□□□ -1.25
HPS4-205ENST00000429411 RNF4P78317 190 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 PLAURQ03405 335 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 CEBPEQ15744 281 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 MESTQ5EB52 335 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 DCAF12L2Q5VW00 463 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 C3orf33Q6P1S2 294 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 GLDNQ6ZMI3 551 aaPredicted RBP7.27□□□□□ -1.25
HPS4-205ENST00000429411 SLC22A18ASQ8N1D0 253 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 OR2AK2Q8NG84 335 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 OR51A2Q8NGJ7 313 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 NUDCD2Q8WVJ2 157 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 RGP1Q92546 391 aaPredicted RBP7.27□□□□□ -1.25
HPS4-205ENST00000429411 CCDC74AQ96AQ1 378 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 ZNF775Q96BV0 537 aaPredicted RBP7.27□□□□□ -1.25
HPS4-205ENST00000429411 CPNE2Q96FN4 548 aaPredicted RBP7.27□□□□□ -1.25
HPS4-205ENST00000429411 GPR137Q96N19 417 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 CUTCQ9NTM9 273 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 PLCL2Q9UPR0 1127 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 ZNF106Q9H2Y7 1883 aaKnown RBP7.27□□□□□ -1.25
HPS4-205ENST00000429411 PTPRSQ13332 1948 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 A0A1B0GUH1 482 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 GGT3PA6NGU5 568 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 TMEM212A6NML5 194 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 H0YIG0 161 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 NDUFS6O75380 124 aaKnown RBP7.27□□□□□ -1.25
HPS4-205ENST00000429411 HTR3BO95264 441 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 MPIG6BO95866 241 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 IGF2P01344 180 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 PGAM2P15259 253 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 ZNF20P17024 532 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 HTR2CP28335 458 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 LUMP51884 338 aaPredicted RBP7.27□□□□□ -1.25
HPS4-205ENST00000429411 SPEM2Q0P670 501 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 OR52W1Q6IF63 320 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 DCXRQ7Z4W1 244 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 DTWD2Q8NBA8 298 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 FGGYQ96C11 551 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 HAO2Q9NYQ3 351 aa7.27□□□□□ -1.25
HPS4-205ENST00000429411 hCG_1807616A0A1W2PRN6 198 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 METTL21EPA6NDL7 271 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 FOXS1O43638 330 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 NDUFA2O43678 99 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 LYPD3O95274 346 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 ITGA5P08648 1049 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 SMIM10L1P0DMW3 83 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 FBLP22087 321 aaKnown RBP7.26□□□□□ -1.25
HPS4-205ENST00000429411 DPP4P27487 766 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 OR1D5P58170 312 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 S100A10P60903 97 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 YPEL5P62699 121 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 TLE3Q04726 772 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 GLO1Q04760 184 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 RASGEF1BQ0VAM2 473 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 RIN1Q13671 783 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 ELOCQ15369 112 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 C2orf68Q2NKX9 166 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 SLC35D3Q5M8T2 416 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 FAM69BQ5VUD6 431 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 ARSKQ6UWY0 536 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 ZNF440Q8IYI8 595 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 INO80EQ8NBZ0 244 aaPredicted RBP7.26□□□□□ -1.25
HPS4-205ENST00000429411 TMEM185AQ8NFB2 350 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 LHFPL5Q8TAF8 219 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 THAP6Q8TBB0 222 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 SMIM10Q96HG1 83 aa7.26□□□□□ -1.25
HPS4-205ENST00000429411 LCORQ96JN0 433 aaPredicted RBP7.26□□□□□ -1.25
HPS4-205ENST00000429411 DCBLD2Q96PD2 775 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms