RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 OR52D1Q9H346 318 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 HIF1ANQ9NWT6 349 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 GRIP1Q9Y3R0 1128 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 WIPI2Q9Y4P8 454 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 STAB1Q9NY15 2570 aa15.63■□□□□ 0.09
PSPC1-202ENST00000427943 GSTM3P21266 225 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 THBS2P35442 1172 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 LSM6P62312 80 aaKnown RBP15.62■□□□□ 0.09
PSPC1-202ENST00000427943 PSG7Q13046 419 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 CCDC92Q53HC0 331 aaPredicted RBP15.62■□□□□ 0.09
PSPC1-202ENST00000427943 LEG1Q6P5S2 330 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 ZNF771Q7L3S4 317 aaPredicted RBP15.62■□□□□ 0.09
PSPC1-202ENST00000427943 ZDHHC21Q8IVQ6 265 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 NPEPL1Q8NDH3 523 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 OR51F2Q8NH61 342 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 CCL17Q92583 94 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 ZNF665Q9H7R5 613 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 CYSLTR2Q9NS75 346 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 TBCCD1Q9NVR7 557 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 CGGBP1Q9UFW8 167 aaPredicted RBP15.62■□□□□ 0.09
PSPC1-202ENST00000427943 STARD10Q9Y365 291 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 ARHGAP32A7KAX9 2087 aa15.62■□□□□ 0.09
PSPC1-202ENST00000427943 RER1O15258 196 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 DBHP09172 617 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 PCMT1P22061 227 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 FPR3P25089 353 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 SLC6A6P31641 620 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 RBMXP38159 391 aaKnown RBP15.61■□□□□ 0.09
PSPC1-202ENST00000427943 MTX3Q5HYI7 312 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 DNM1P34Q6PK57 102 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 CYP2R1Q6VVX0 501 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 JAZF1Q86VZ6 243 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 OR1F12Q8NHA8 337 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 SAMD8Q96LT4 415 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 NMNAT3Q96T66 252 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 IFT27Q9BW83 186 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 EGLN1Q9GZT9 426 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 FN3KQ9H479 309 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 NDE1Q9NXR1 346 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 KLHL21Q9UJP4 597 aa15.61■□□□□ 0.09
PSPC1-202ENST00000427943 PURGQ9UJV8 347 aaKnown RBP15.61■□□□□ 0.09
PSPC1-202ENST00000427943 WNK2Q9Y3S1 2297 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 IGLV1-36A0A0B4J1U3 117 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 OR6C6A6NF89 314 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 UBOX5O94941 541 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 ADH4P08319 380 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 HIST1H1CP16403 213 aaKnown RBP15.6■□□□□ 0.09
PSPC1-202ENST00000427943 ATP6V1B2P21281 511 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 LIPAP38571 399 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 ERFP50548 548 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 TNFAIP6P98066 277 aaPredicted RBP15.6■□□□□ 0.09
PSPC1-202ENST00000427943 KCNMB1Q16558 191 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 RFX4Q33E94 735 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 ZMAT1Q5H9K5 638 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 CORO6Q6QEF8 472 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 OR4K13Q8NH42 304 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 RAB1CQ92928 201 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 TIMD4Q96H15 378 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 SRA1Q9HD15 236 aaKnown RBP15.6■□□□□ 0.09
PSPC1-202ENST00000427943 IL1RAPQ9NPH3 570 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 RPRD1BQ9NQG5 326 aaKnown RBP15.6■□□□□ 0.09
PSPC1-202ENST00000427943 DCAF16Q9NXF7 216 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 PTTG3PQ9NZH4 202 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 ZDHHC8Q9ULC8 765 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 TMCC3Q9ULS5 477 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 LHFPL6Q9Y693 200 aa15.6■□□□□ 0.09
PSPC1-202ENST00000427943 ISPDA4D126 451 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 DEAF1O75398 565 aaPredicted RBP15.59■□□□□ 0.09
PSPC1-202ENST00000427943 RENP00797 406 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 IGHV2-5P01817 119 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 CD55P08174 381 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 CRABP1P29762 137 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 GSSP48637 474 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 PGBD2Q6P3X8 592 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 ZNF620Q6ZNG0 422 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 Q6ZR03 302 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 OR6V1Q8N148 313 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 SDR9C7Q8NEX9 313 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 OR9Q2Q8NGE9 314 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 GNPDA2Q8TDQ7 276 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 RAB39BQ96DA2 213 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 CMBLQ96DG6 245 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 DIRC2Q96SL1 478 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 GAL3ST1Q99999 423 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 C19orf24Q9BVV8 132 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 EGLN3Q9H6Z9 239 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 B9D1Q9UPM9 204 aa15.59■□□□□ 0.09
PSPC1-202ENST00000427943 ARPC3O15145 178 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 KITLGP21583 273 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 NOS3P29474 1203 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 IFNGR2P38484 337 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 CDK5R2Q13319 367 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 SLC35F1Q5T1Q4 408 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 ACSM5Q6NUN0 579 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 LINC00346Q8IVM7 164 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 OR5AS1Q8N127 324 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 FITM2Q8N6M3 262 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 OR2Z1Q8NG97 314 aa15.58■□□□□ 0.08
PSPC1-202ENST00000427943 METTL17Q9H7H0 456 aaPredicted RBP15.58■□□□□ 0.08
PSPC1-202ENST00000427943 TRAV20A0A0B4J274 112 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms