RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ZNF879B4DU55 563 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 DCTN6O00399 190 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 EIF1BO60739 113 aaKnown RBP13.8□□□□□ -0.2
SHOX2-202ENST00000425436 CYTIPO60759 359 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 HLA-DQA2P01906 255 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 OCM2P0CE71 109 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 OCMP0CE72 109 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-202ENST00000425436 BMP5P22003 454 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 OXA1LQ15070 435 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 OR2A2Q6IF42 318 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 SLC18B1Q6NT16 456 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 KCTD18Q6PI47 426 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-202ENST00000425436 BTLAQ7Z6A9 289 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 MCEMP1Q8IX19 187 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 TUSC5Q8IXB3 177 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 SYT14Q8NB59 555 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 OR6N2Q8NGY6 317 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 OTOSQ8NHW6 89 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 ITLN2Q8WWU7 325 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-202ENST00000425436 RBP7Q96R05 134 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 DAPK2Q9UIK4 370 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 ING1Q9UK53 422 aaPredicted RBP13.8□□□□□ -0.2
SHOX2-202ENST00000425436 ZNF281Q9Y2X9 895 aa13.8□□□□□ -0.2
SHOX2-202ENST00000425436 IGLV1-36A0A0B4J1U3 117 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 CLEC18AA5D8T8 446 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 WIPF3A6NGB9 483 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 H7C1C5 153 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 ZNF593O00488 134 aaPredicted RBP13.79□□□□□ -0.2
SHOX2-202ENST00000425436 DNPH1O43598 174 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 KHDRBS3O75525 346 aaKnown RBP13.79□□□□□ -0.2
SHOX2-202ENST00000425436 NR2C1P13056 603 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 IFNGR1P15260 489 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 CTSSP25774 331 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 KIR2DL2P43627 348 aaPredicted RBP13.79□□□□□ -0.2
SHOX2-202ENST00000425436 LCN6P62502 163 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 ZMAT1Q5H9K5 638 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 TMEM225Q6GV28 225 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 VWA1Q6PCB0 445 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 XKRXQ6PP77 449 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 CLEC18BQ6UXF7 455 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 UNQ9370/PRO34162Q6UXP9 181 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 GPAT4Q86UL3 456 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 UEVLDQ8IX04 471 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 YIPF7Q8N8F6 280 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 CLEC18CQ8NCF0 446 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 OXGR1Q96P68 337 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 ABCB9Q9NP78 766 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 ACOXLQ9NUZ1 547 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 FAIMQ9NVQ4 179 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 KLHL9Q9P2J3 617 aa13.79□□□□□ -0.2
SHOX2-202ENST00000425436 ANKRD61A6NGH8 418 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 AQP7P3A6NL99 342 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 TMCC2O75069 709 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 TNFSF13O75888 250 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 HRGP04196 525 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 UCHL1P09936 223 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 MAPK3P27361 379 aaPredicted RBP13.78□□□□□ -0.2
SHOX2-202ENST00000425436 CHRNB4P30926 498 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 P2RY4P51582 365 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 ALKBH1Q13686 389 aaKnown RBP13.78□□□□□ -0.2
SHOX2-202ENST00000425436 RNPS1Q15287 305 aaKnown RBP13.78□□□□□ -0.2
SHOX2-202ENST00000425436 TEX30Q5JUR7 227 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 THEM4Q5T1C6 240 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 FDX2Q6P4F2 183 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 GDPD1Q8N9F7 314 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 SSC4DQ8WTU2 575 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 CA5BP1Q8WTZ4 195 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 THEM6Q8WUY1 208 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 GMPPAQ96IJ6 420 aaPredicted RBP13.78□□□□□ -0.2
SHOX2-202ENST00000425436 DCLRE1CQ96SD1 692 aaKnown RBP13.78□□□□□ -0.2
SHOX2-202ENST00000425436 KCNK17Q96T54 332 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 ATF6BQ99941 703 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 SP140LQ9H930 580 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 RASD1Q9Y272 281 aa13.78□□□□□ -0.2
SHOX2-202ENST00000425436 FABP12A6NFH5 140 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 TVP23AA6NH52 213 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 FAM90A27PA6NNH2 459 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF716A6NP11 495 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 PDCD5O14737 125 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 VAMP5O95183 116 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 YES1P07947 543 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF823P16415 610 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 POU3F1Q03052 451 aaPredicted RBP13.77□□□□□ -0.21
SHOX2-202ENST00000425436 ROM1Q03395 351 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 DBPQ10586 325 aaPredicted RBP13.77□□□□□ -0.21
SHOX2-202ENST00000425436 GUSBP1Q15486 140 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 LIPNQ5VXI9 398 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 ABLIM2Q6H8Q1 611 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 FAM214BQ7L5A3 538 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 DPY19L4Q7Z388 723 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 NUFIP2Q7Z417 695 aaKnown RBP13.77□□□□□ -0.21
SHOX2-202ENST00000425436 LYSMD2Q8IV50 215 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF679Q8IYX0 411 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 RFLNBQ8N5W9 214 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 LILRB4Q8NHJ6 448 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 SETD6Q8TBK2 473 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 STARD4Q96DR4 205 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 DIRAS2Q96HU8 199 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 ZFP3Q96NJ6 502 aa13.77□□□□□ -0.21
SHOX2-202ENST00000425436 COMMD4Q9H0A8 199 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms