RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 EBF4Q9BQW3 602 aa10.31□□□□□ -0.76
HLA-DQB3-203ENST00000425319 FNDC11Q9BVV2 318 aa10.31□□□□□ -0.76
HLA-DQB3-203ENST00000425319 C1QTNF5Q9BXJ0 243 aa10.31□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TMBIM4Q9HC24 238 aa10.31□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TMEM100Q9NV29 134 aa10.31□□□□□ -0.76
HLA-DQB3-203ENST00000425319 ERVK-18Q9QC07 812 aa10.31□□□□□ -0.76
HLA-DQB3-203ENST00000425319 HIF3AQ9Y2N7 669 aa10.31□□□□□ -0.76
HLA-DQB3-203ENST00000425319 UGT2A1Q9Y4X1 527 aa10.31□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TRAV40A0A0B4J280 105 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 IGHV2-70DA0A0C4DH43 119 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 CEACAM18A8MTB9 384 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 EFCAB9A8MZ26 197 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 HOXA3O43365 443 aaPredicted RBP10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 LYPD3O95274 346 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 FSTL3O95633 263 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 NPPAP01160 153 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 THY1P04216 161 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 OMGP23515 440 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 SLC9A3P48764 834 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 NPY4RP50391 375 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 RAG2P55895 527 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 METTL21CQ5VZV1 264 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 OLFML2AQ68BL7 652 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 RNF113BQ8IZP6 322 aaKnown RBP10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TMEM86BQ8N661 226 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 KIR3DL3Q8N743 410 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 CLDN22Q8N7P3 220 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 OR8G5Q8NG78 346 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 OR4D11Q8NGI4 311 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 OR10S1Q8NGN2 331 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 OR51A7Q8NH64 312 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TAMM41Q96BW9 452 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 NUDT16L1Q9BRJ7 211 aaKnown RBP10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TRIM15Q9C019 465 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 MMP27Q9H306 513 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 GCM1Q9NP62 436 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TRIM36Q9NQ86 728 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 POLE4Q9NR33 117 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 POLR1DQ9Y2S0 133 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 STARD10Q9Y365 291 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 CAB39Q9Y376 341 aaPredicted RBP10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 POMT1Q9Y6A1 747 aa10.3□□□□□ -0.76
HLA-DQB3-203ENST00000425319 IGHV3OR16-10A0A075B7F0 116 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 CLPSL1A2RUU4 121 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 FAM181BA6NEQ2 426 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 OR6C6A6NF89 314 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 SRRM5B3KS81 715 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 F5H0A9 414 aaPredicted RBP10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 ENSAO43768 121 aaKnown RBP10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 PITPNBP48739 271 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 CENPAP49450 140 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 MALLQ13021 153 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 AQP6Q13520 282 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 ZNF181Q2M3W8 571 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 PGM2L1Q6PCE3 622 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 FIP1L1Q6UN15 594 aaKnown RBP10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 GATAD2BQ8WXI9 593 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 APOBEC3DQ96AK3 386 aaPredicted RBP10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TLCD1Q96CP7 247 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TPD52L3Q96J77 140 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 ZNF48Q96MX3 618 aaPredicted RBP10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 SIKE1Q9BRV8 207 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 RERGLQ9H628 205 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TMEM165Q9HC07 324 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 KRCC1Q9NPI7 259 aaPredicted RBP10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TNFRSF19Q9NS68 423 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 C20orf141Q9NUB4 165 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 GID8Q9NWU2 228 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 AP3M1Q9Y2T2 418 aa10.29□□□□□ -0.76
HLA-DQB3-203ENST00000425319 BTBD17A6NE02 478 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 P2RY10O00398 339 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 NDUFA2O43678 99 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 KHDRBS3O75525 346 aaKnown RBP10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 PLATP00750 562 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TSPAN19P0C672 248 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 IGHV4-38-2P0DP08 117 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 SEC61A1P61619 476 aaKnown RBP10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 LSM6P62312 80 aaKnown RBP10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 HLXQ14774 488 aaPredicted RBP10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TRAM2Q15035 370 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 MAPRE2Q15555 327 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 TUSC1Q2TAM9 212 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 DEFB112Q30KQ8 113 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 AGBL2Q5U5Z8 902 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 NANOGP8Q6NSW7 305 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 DNM1P34Q6PK57 102 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 ZNF620Q6ZNG0 422 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 DCDC5Q6ZRR9 648 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 FOXL2NBQ6ZUU3 175 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 CYP4Z1Q86W10 505 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 OR5AS1Q8N127 324 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 PNLDC1Q8NA58 520 aaKnown RBP10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 GJC3Q8NFK1 279 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 OR8J3Q8NGG0 315 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 OR1F12Q8NHA8 337 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 SSMEM1Q8WWF3 244 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 NMD3Q96D46 503 aaKnown RBP10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 MEGF10Q96KG7 1140 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 CDADC1Q9BWV3 514 aa10.28□□□□□ -0.76
HLA-DQB3-203ENST00000425319 DPAGT1Q9H3H5 408 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms