RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SLIT1O75093 1534 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 COL24A1Q17RW2 1714 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 BTAF1O14981 1849 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 MIA3Q5JRA6 1907 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 SBF1O95248 1867 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ALS2Q96Q42 1657 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 DIP2CQ9Y2E4 1556 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ROBO3Q96MS0 1386 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 A0A0A6YYD4 124 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 A0A1W2PP18 115 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 RFPL4AA6NLU0 287 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ZNF99A8MXY4 864 aaPredicted RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 HSBP1L1C9JCN9 74 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 RFPL4AL1F8VTS6 287 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 H7C2Y5 167 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 M0R3G1 203 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 NDUFS8O00217 210 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 CDC7O00311 574 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 SLC28A1O00337 649 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 BTN3A3O00478 584 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 PHYHO14832 338 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ANGPT2O15123 496 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 STX7O15400 261 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 CALUO43852 315 aaPredicted RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 HPGDSO60760 199 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 SMPD2O60906 423 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ICOSLGO75144 302 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 MED6O75586 246 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 MPC2O95563 127 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 RAB3DO95716 219 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 CLIC3O95833 236 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 OTCP00480 354 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 WNT2P09544 360 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 OR4E1P0C645 316 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 OR8G3PP0DMU2 310 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 MLNP12872 115 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 RNH1P13489 461 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ME2P23368 584 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 CRHBPP24387 322 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 MYL9P24844 172 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ELK4P28324 431 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 GDI1P31150 447 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 TGFBR2P37173 567 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 CEACAM6P40199 344 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 CD79BP40259 229 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 NSFP46459 744 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 KCNJ3P48549 501 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 SUCLG1P53597 346 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 PRMT2P55345 433 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 UCP2P55851 309 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 STARD6P59095 220 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 HAND2P61296 217 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 NCS1P62166 190 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 DEFA6Q01524 100 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ECH1Q13011 328 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 PDIA2Q13087 525 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 FADDQ13158 208 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 EXOSC2Q13868 293 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 GANABQ14697 944 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 GPNMBQ14956 572 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 DPYSL2Q16555 572 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 HADHQ16836 314 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 RFX4Q33E94 735 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 KLHL12Q53G59 568 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 RBM48Q5RL73 367 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 TPRG1LQ5T0D9 272 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 PDZK1Q5T2W1 519 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 C1orf185Q5T7R7 199 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 LIN9Q5TKA1 542 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 SLC25A24Q6NUK1 477 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ERICH5Q6P6B1 374 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 C11orf88Q6PI97 169 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 DEGS2Q6QHC5 323 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 SCIMPQ6UWF3 145 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 DPPA2Q7Z7J5 298 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 CTAGE3PQ8IX95 158 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 OFCC1Q8IZS5 231 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 PGAM4Q8N0Y7 254 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 OR8H3Q8N146 312 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 PYROXD2Q8N2H3 581 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 LRRC18Q8N456 261 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ZNF321PQ8N8H1 164 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 GDPD1Q8N9F7 314 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 OR8D4Q8NGM9 314 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 OR5M1Q8NGP8 315 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 CLHC1Q8NHS4 586 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 FAM110BQ8TC76 370 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 TOP1MTQ969P6 601 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 TUBGCP3Q96CW5 907 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 MRPL38Q96DV4 380 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 CMTM5Q96DZ9 223 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 EEF2KMTQ96G04 330 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 CELF6Q96J87 481 aaKnown RBP2.42□□□□□ -2.02
LINC01040-201ENST00000425048 ELMO2Q96JJ3 720 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 HYLS1Q96M11 299 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 FAM111AQ96PZ2 611 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 PFDN5Q99471 154 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 P2RY13Q9BPV8 354 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 NICN1Q9BSH3 213 aa2.42□□□□□ -2.02
LINC01040-201ENST00000425048 TBCDQ9BTW9 1192 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms