RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ALDH16A1Q8IZ83 802 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 LINC00471Q8N535 108 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 CPEB3Q8NE35 698 aaKnown RBP11.05□□□□□ -0.64
VRK3-203ENST00000424804 SDR9C7Q8NEX9 313 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 OR10G2Q8NGC3 310 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 OR4C15Q8NGM1 316 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 GTF3AQ92664 365 aaKnown RBP11.05□□□□□ -0.64
VRK3-203ENST00000424804 POP5Q969H6 163 aaKnown RBP11.05□□□□□ -0.64
VRK3-203ENST00000424804 TSSK2Q96PF2 358 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 NMNAT3Q96T66 252 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 ZNF416Q9BWM5 594 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 CADM1Q9BY67 442 aaKnown RBP11.05□□□□□ -0.64
VRK3-203ENST00000424804 C1orf198Q9H425 327 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 RPRD1BQ9NQG5 326 aaKnown RBP11.05□□□□□ -0.64
VRK3-203ENST00000424804 G6PC2Q9NQR9 355 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 POLE4Q9NR33 117 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 HIF1ANQ9NWT6 349 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 POMPQ9Y244 141 aa11.05□□□□□ -0.64
VRK3-203ENST00000424804 TRRAPQ9Y4A5 3859 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 C12orf71A8MTZ7 269 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 C17orf100A8MU93 164 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 AHCYL1O43865 530 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 DEAF1O75398 565 aaPredicted RBP11.04□□□□□ -0.64
VRK3-203ENST00000424804 E2F6O75461 281 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 MPZL1O95297 269 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 HLA-DQA2P01906 255 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 MSMBP08118 114 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 HIST1H1CP16403 213 aaKnown RBP11.04□□□□□ -0.64
VRK3-203ENST00000424804 ENDOGQ14249 297 aaKnown RBP11.04□□□□□ -0.64
VRK3-203ENST00000424804 MEP1BQ16820 701 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 RGS7BPQ6MZT1 257 aaPredicted RBP11.04□□□□□ -0.64
VRK3-203ENST00000424804 PGM2L1Q6PCE3 622 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 OR52E2Q8NGJ4 325 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 GIPC3Q8TF64 312 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 TMEM186Q96B77 213 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 OR2H1Q9GZK4 316 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 NARFLQ9H6Q4 476 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 NKIRAS2Q9NYR9 191 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 VSX1Q9NZR4 365 aaPredicted RBP11.04□□□□□ -0.64
VRK3-203ENST00000424804 TAAR3PQ9P1P4 343 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 EIF3KQ9UBQ5 218 aaKnown RBP11.04□□□□□ -0.64
VRK3-203ENST00000424804 TIMM10BQ9Y5J6 103 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 CDH10Q9Y6N8 788 aa11.04□□□□□ -0.64
VRK3-203ENST00000424804 H3BN98 237 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 DOK2O60496 412 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 ATP5HO75947 161 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 SNAP29O95721 258 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 TXNDC12O95881 172 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 TFP02787 698 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 CRABP1P29762 137 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 SRP14P37108 136 aaKnown RBP11.03□□□□□ -0.64
VRK3-203ENST00000424804 RAD52P43351 418 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 HMGA2P52926 109 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 UCP2P55851 309 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 CBX1P83916 185 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 GLO1Q04760 184 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.03□□□□□ -0.64
VRK3-203ENST00000424804 NKPD1Q17RQ9 610 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 SPATA46Q5T0L3 261 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 RPL13AP3Q6NVV1 102 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 FOXL2NBQ6ZUU3 175 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 GLCCI1Q86VQ1 547 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 GLB1L2Q8IW92 636 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 CYB561A3Q8NBI2 242 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 OR1J1Q8NGS3 322 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 C11orf40Q8WZ69 217 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 TSSK6Q9BXA6 273 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 PLA2G12AQ9BZM1 189 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 WNT5BQ9H1J7 359 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 YY1AP1Q9H869 796 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 LPAR2Q9HBW0 351 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 ARMC1Q9NVT9 282 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 ASH2LQ9UBL3 628 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 CACNG2Q9Y698 323 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 CMYA5Q8N3K9 4069 aa11.03□□□□□ -0.64
VRK3-203ENST00000424804 DCTN6O00399 190 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 ARPC3O15145 178 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 PPIHO43447 177 aaKnown RBP11.02□□□□□ -0.65
VRK3-203ENST00000424804 FKBP6O75344 327 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 WNT5AP41221 380 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 CRYBB2P43320 205 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 HTR5AP47898 357 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 SELENOVP59797 346 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 CCL8P80075 99 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 SCRN3Q0VDG4 424 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 ZNF770Q6IQ21 691 aaPredicted RBP11.02□□□□□ -0.65
VRK3-203ENST00000424804 RASSF6Q6ZTQ3 369 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 OR8D4Q8NGM9 314 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 ABHD4Q8TB40 342 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 SYNPRQ8TBG9 265 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 TEX47Q8TBZ9 253 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 OTULINQ96BN8 352 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 NIPSNAP1Q9BPW8 284 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 TMPRSS13Q9BYE2 586 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 METTL17Q9H7H0 456 aaPredicted RBP11.02□□□□□ -0.65
VRK3-203ENST00000424804 HINT3Q9NQE9 182 aaKnown RBP11.02□□□□□ -0.65
VRK3-203ENST00000424804 PLEK2Q9NYT0 353 aa11.02□□□□□ -0.65
VRK3-203ENST00000424804 PDP1Q9P0J1 537 aaPredicted RBP11.02□□□□□ -0.65
VRK3-203ENST00000424804 B9D1Q9UPM9 204 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms