RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 PRG2P13727 222 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 ETFAP13804 333 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 KITLGP21583 273 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 FPR3P25089 353 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 PHBP35232 272 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 PMELP40967 661 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 MAGEA4P43358 317 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 GSK3BP49841 420 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 RAD23AP54725 363 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 HOXC5Q00444 222 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 C2orf54Q08AI8 447 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 POU4F2Q12837 409 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 KIAA0040Q15053 153 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 SYPL1Q16563 259 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 KIAA1109Q2LD37 5005 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 ZNF181Q2M3W8 571 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 RABL3Q5HYI8 236 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 C9orf66Q5T8R8 295 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 OR2T2Q6IF00 324 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 WDR88Q6ZMY6 472 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 ZNF836Q6ZNA1 936 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 SLC35D2Q76EJ3 337 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 CSMD3Q7Z407 3707 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 PXKQ7Z7A4 578 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 TMEM139Q8IV31 216 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 CLECL1Q8IZS7 167 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 CLDN22Q8N7P3 220 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 ADPRHL1Q8NDY3 354 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 OR52P1PQ8NH57 321 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 OR6X1Q8NH79 312 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 C17orf50Q8WW18 174 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 SLC25A44Q96H78 314 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-203ENST00000424270 CCDC115Q96NT0 180 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 TRNT1Q96Q11 434 aaKnown RBP5.1□□□□□ -1.59
SDCBP-203ENST00000424270 ZNF607Q96SK3 696 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 CPPED1Q9BRF8 314 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-203ENST00000424270 C1orf50Q9BV19 199 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 WNT10AQ9GZT5 417 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 POFUT1Q9H488 388 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.1□□□□□ -1.59
SDCBP-203ENST00000424270 RNF7Q9UBF6 113 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 PITPNC1Q9UKF7 332 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 ZNF232Q9UNY5 417 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 CHST2Q9Y4C5 530 aa5.1□□□□□ -1.59
SDCBP-203ENST00000424270 CDHR4A6H8M9 788 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 OOEPA6NGQ2 149 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 SEC14L6B5MCN3 397 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 H3BQF6 201 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 LSM1O15116 133 aaKnown RBP5.09□□□□□ -1.59
SDCBP-203ENST00000424270 NDUFB3O43676 98 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 GLRA3O75311 464 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 FSTL3O95633 263 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 LHBP01229 141 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 HLA-DPB1P04440 258 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 MMP7P09237 267 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-203ENST00000424270 TUBG1P23258 451 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 PRPH2P23942 346 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 PRKAR1BP31321 381 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 CDAP32320 146 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 THBS3P49746 956 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 VEGFCP49767 419 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 ERFP50548 548 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 PRKAA2P54646 552 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 PCBD1P61457 104 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 NCALDP61601 193 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 HOXA4Q00056 320 aaPredicted RBP5.09□□□□□ -1.59
SDCBP-203ENST00000424270 PSG4Q00888 419 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 EGR4Q05215 589 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 FUT5Q11128 374 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 IKZF1Q13422 519 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 PDCD4Q53EL6 469 aaKnown RBP5.09□□□□□ -1.59
SDCBP-203ENST00000424270 ALG10BQ5I7T1 473 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 PRAMEF6Q5VXH4 476 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 LRFN4Q6PJG9 635 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 LRRC74BQ6ZQY2 392 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 C8orf86Q6ZUL3 223 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 SERPINA11Q86U17 422 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 LRRC34Q8IZ02 419 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 Q8N2B8 174 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 KRTCAP2Q8N6L1 136 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 SPC24Q8NBT2 197 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 OR8G5Q8NG78 346 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 OR52H1Q8NGJ2 320 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 RPS4Y2Q8TD47 263 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 LINC00476Q8WZB0 136 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 PTP4A1Q93096 173 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 MCHR2Q969V1 340 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 HAVCR1Q96D42 359 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 L3HYPDHQ96EM0 354 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 COG8Q96MW5 612 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 OR2H1Q9GZK4 316 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 GSTO2Q9H4Y5 243 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 METTL8Q9H825 291 aaKnown RBP5.09□□□□□ -1.59
SDCBP-203ENST00000424270 SIAEQ9HAT2 523 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 EDA2RQ9HAV5 297 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 TUBG2Q9NRH3 451 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 TMEM100Q9NV29 134 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 PTTG3PQ9NZH4 202 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 KLHL14Q9P2G3 628 aa5.09□□□□□ -1.59
SDCBP-203ENST00000424270 AURKCQ9UQB9 309 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms