RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 FMO3P31513 532 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 GPR6P46095 362 aaPredicted RBP3.11□□□□□ -1.91
TRPS1-204ENST00000422939 PSMD4P55036 377 aaKnown RBP3.11□□□□□ -1.91
TRPS1-204ENST00000422939 DLX1P56177 255 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 STXBP1P61764 594 aaKnown RBP3.11□□□□□ -1.91
TRPS1-204ENST00000422939 IRF8Q02556 426 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 TWF1Q12792 350 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 EIF4EBP1Q13541 118 aaPredicted RBP3.11□□□□□ -1.91
TRPS1-204ENST00000422939 NCF4Q15080 339 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 PGGHGQ32M88 737 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 GPR157Q5UAW9 335 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 CNIH2Q6PI25 160 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 Q6ZSR3 168 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 HDDC2Q7Z4H3 204 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 FAM220AQ7Z4H9 259 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 C8orf31Q8N9H6 132 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 MDS2Q8NDY4 140 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 CA5BP1Q8WTZ4 195 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 SDR42E1Q8WUS8 393 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 ACOT11Q8WXI4 607 aaPredicted RBP3.11□□□□□ -1.91
TRPS1-204ENST00000422939 DNAJC1Q96KC8 554 aaKnown RBP3.11□□□□□ -1.91
TRPS1-204ENST00000422939 CSPG4P5Q96PW8 444 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 TMEM246Q9BRR3 403 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 RIOK2Q9BVS4 552 aaKnown RBP3.11□□□□□ -1.91
TRPS1-204ENST00000422939 UCK2Q9BZX2 261 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 AIG1Q9NVV5 245 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 CALYQ9NYX4 217 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 ZNF225Q9UK10 706 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 DDX19BQ9UMR2 479 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 FLVCR2Q9UPI3 526 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 TMEM131LA2VDJ0 1609 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 ABCA9Q8IUA7 1624 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 MSH6P52701 1360 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 PIK3R4Q99570 1358 aa3.11□□□□□ -1.91
TRPS1-204ENST00000422939 A0A0B4J2A0 478 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 GLYATL1P3A0A0U1RQE8 302 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 LOC100506127A0A0U1RQW1 187 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 A0A1B0GUH1 482 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 A0A1W2PQ67 120 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 LRCOL1A6NCL2 159 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 RBMY1BA6NDE4 496 aaKnown RBP3.1□□□□□ -1.91
TRPS1-204ENST00000422939 RBMY1EA6NEQ0 496 aaKnown RBP3.1□□□□□ -1.91
TRPS1-204ENST00000422939 A8MUA0 341 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 INSP01308 110 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 IFNW1P05000 195 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 SERPINA5P05154 406 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 RBMY1DP0C7P1 496 aaKnown RBP3.1□□□□□ -1.91
TRPS1-204ENST00000422939 RBMY1A1P0DJD3 496 aaKnown RBP3.1□□□□□ -1.91
TRPS1-204ENST00000422939 VDAC2P45880 294 aaPredicted RBP3.1□□□□□ -1.91
TRPS1-204ENST00000422939 SUB1P53999 127 aaKnown RBP eCLIP3.1□□□□□ -1.91
TRPS1-204ENST00000422939 TAS2R19P59542 299 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 HERVK_113P61574 105 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 ACTA2P62736 377 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 ACTG2P63267 376 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 ACTC1P68032 377 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 ACTA1P68133 377 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 CLINT1Q14677 625 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 TRAM2Q15035 370 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 PSMD5Q16401 504 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 NRF1Q16656 503 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 Q3ZCU0 254 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 C1orf100Q5SVJ3 147 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 MLIPQ5VWP3 458 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 C1orf94Q6P1W5 598 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 ULK3Q6PHR2 472 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 APRG1Q8IVJ8 170 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 MYOCDQ8IZQ8 938 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 CMTM8Q8IZV2 173 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 FAM58AQ8N1B3 248 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 FAM71E2Q8N5Q1 922 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 OR5B3Q8NH48 314 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 OR9G1Q8NH87 305 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 PIH1D2Q8WWB5 315 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 FGF14Q92915 247 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 MED8Q96G25 268 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 MSANTD3Q96H12 275 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 TSG101Q99816 390 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 SH3GL3Q99963 347 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 SLC17A9Q9BYT1 436 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 MRPL37Q9BZE1 423 aaKnown RBP3.1□□□□□ -1.91
TRPS1-204ENST00000422939 C20orf85Q9H1P6 137 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 GAL3ST2Q9H3Q3 398 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 CWH43Q9H720 699 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 SLC25A22Q9H936 323 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 SHPKQ9UHJ6 478 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 ING4Q9UNL4 249 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 DEPDC5O75140 1603 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 ITSN2Q9NZM3 1697 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 CNTNAP1P78357 1384 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 MAP3K5Q99683 1374 aa3.1□□□□□ -1.91
TRPS1-204ENST00000422939 ARHGEF28Q8N1W1 1705 aaKnown RBP3.1□□□□□ -1.91
TRPS1-204ENST00000422939 A2ML1A8K2U0 1454 aa3.09□□□□□ -1.91
TRPS1-204ENST00000422939 TIAM1Q13009 1591 aa3.09□□□□□ -1.91
TRPS1-204ENST00000422939 TET3O43151 1660 aa3.09□□□□□ -1.91
TRPS1-204ENST00000422939 IGLV3-22A0A075B6J6 115 aa3.09□□□□□ -1.91
TRPS1-204ENST00000422939 TRAV6A0A075B6T7 132 aa3.09□□□□□ -1.91
TRPS1-204ENST00000422939 A6NDX4 124 aa3.09□□□□□ -1.91
TRPS1-204ENST00000422939 C12orf77C9JDV5 145 aa3.09□□□□□ -1.91
TRPS1-204ENST00000422939 FARS2O95363 451 aaKnown RBP3.09□□□□□ -1.91
TRPS1-204ENST00000422939 APOA1P02647 267 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms