RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TRUB1Q8WWH5 349 aaKnown RBP8.03□□□□□ -1.12
PDGFC-202ENST00000422544 CYGBQ8WWM9 190 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 NRGNQ92686 78 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 KCTD12Q96CX2 325 aaKnown RBP8.03□□□□□ -1.12
PDGFC-202ENST00000422544 POM121Q96HA1 1249 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 RDH12Q96NR8 316 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 TEAD3Q99594 435 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 PITX2Q99697 317 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 UBTD1Q9HAC8 227 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 IMPAD1Q9NX62 359 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 PLEK2Q9NYT0 353 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 AASSQ9UDR5 926 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 KCNG2Q9UJ96 466 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 GDF2Q9UK05 429 aaPredicted RBP8.03□□□□□ -1.12
PDGFC-202ENST00000422544 POU2F3Q9UKI9 436 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 COMMD3-BMI1R4GMX3 469 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 RTTNQ86VV8 2226 aa8.03□□□□□ -1.12
PDGFC-202ENST00000422544 LOC100509620A0A075B734 347 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 C5orf49A4QMS7 147 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 E7EQL1 145 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 SYNGR3O43761 229 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 DOK2O60496 412 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 SELENOFO60613 162 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 TMCC2O75069 709 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 CLIC3O95833 236 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 APLNRP35414 380 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 NAA10P41227 235 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-202ENST00000422544 HTR5AP47898 357 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 GDI2P50395 445 aaKnown RBP8.02□□□□□ -1.13
PDGFC-202ENST00000422544 HCCSP53701 268 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 CDH11P55287 796 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 SNRPGP62308 76 aaKnown RBP8.02□□□□□ -1.13
PDGFC-202ENST00000422544 PCK2Q16822 640 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 TBC1D28Q2M2D7 210 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 ZNF672Q499Z4 452 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-202ENST00000422544 TEX30Q5JUR7 227 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 ELFN2Q5R3F8 820 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 NXNL2Q5VZ03 156 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 KRT80Q6KB66 452 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 VHLLQ6RSH7 139 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 DPY19L4Q7Z388 723 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 DCXRQ7Z4W1 244 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 TIGD4Q8IY51 512 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 DHRSXQ8N5I4 330 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 OR4F15Q8NGB8 312 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 OR1J2Q8NGS2 313 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 OR6N2Q8NGY6 317 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 OR1F12Q8NHA8 337 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 SLC7A6Q92536 515 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 MAP6Q96JE9 813 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 POM121L2Q96KW2 1035 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 ZNF582Q96NG8 517 aaPredicted RBP8.02□□□□□ -1.13
PDGFC-202ENST00000422544 INTS14Q96SY0 518 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 VCXQ9H320 206 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 LIME1Q9H400 295 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 C1orf198Q9H425 327 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 MARCH7Q9H992 704 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 CDH20Q9HBT6 801 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 CISD1Q9NZ45 108 aaKnown RBP8.02□□□□□ -1.13
PDGFC-202ENST00000422544 DNAJC27Q9NZQ0 273 aa8.02□□□□□ -1.13
PDGFC-202ENST00000422544 OR6C6A6NF89 314 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 SLC22A31A6NKX4 558 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 HS3ST1O14792 307 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 ENTPD6O75354 484 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 MRPL3P09001 348 aaKnown RBP8.01□□□□□ -1.13
PDGFC-202ENST00000422544 DBHP09172 617 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 FAM157BP0CG42 384 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 COX5BP10606 129 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 NR4A1P22736 598 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 HTR1FP30939 366 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 THBS4P35443 961 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 ADARB1P78563 741 aaKnown RBP8.01□□□□□ -1.13
PDGFC-202ENST00000422544 GALK2Q01415 458 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 KEAP1Q14145 624 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 EIF2B1Q14232 305 aaKnown RBP8.01□□□□□ -1.13
PDGFC-202ENST00000422544 RAB35Q15286 201 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 RSPO1Q2MKA7 263 aaPredicted RBP8.01□□□□□ -1.13
PDGFC-202ENST00000422544 SLC25A30Q5SVS4 291 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 LCN1P1Q5VSP4 162 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 TTC23Q5W5X9 447 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 SPATC1Q76KD6 591 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 GID4Q8IVV7 300 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 ENTHD1Q8IYW4 607 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 OR10S1Q8NGN2 331 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 RHOXF1Q8NHV9 184 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 LURAP1Q96LR2 239 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 APOL4Q9BPW4 351 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 ADI1Q9BV57 179 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 OR51B6Q9H340 312 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 PNRC2Q9NPJ4 139 aaKnown RBP8.01□□□□□ -1.13
PDGFC-202ENST00000422544 CENPMQ9NSP4 180 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 SPEF1Q9Y4P9 236 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 PRRC2AP48634 2157 aaKnown RBP8.01□□□□□ -1.13
PDGFC-202ENST00000422544 ZANQ9Y493 2812 aa8.01□□□□□ -1.13
PDGFC-202ENST00000422544 F5H5K5 113 aa8□□□□□ -1.13
PDGFC-202ENST00000422544 GPRIN2O60269 458 aa8□□□□□ -1.13
PDGFC-202ENST00000422544 MPZL2O60487 215 aa8□□□□□ -1.13
PDGFC-202ENST00000422544 APOL3O95236 402 aa8□□□□□ -1.13
PDGFC-202ENST00000422544 GABRB1P18505 474 aa8□□□□□ -1.13
PDGFC-202ENST00000422544 CAPGP40121 348 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms