RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 D2HGDHQ8N465 521 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 POFUT1Q9H488 388 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 AKAP7Q9P0M2 348 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-213ENST00000421756 NOP16Q9Y3C1 178 aaKnown RBP11.93□□□□□ -0.5
MCF2L-213ENST00000421756 IGHV3-9P01782 118 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 RPS18P62269 152 aaKnown RBP11.93□□□□□ -0.5
MCF2L-213ENST00000421756 RAET1LQ5VY80 246 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 STEAP1BQ6NZ63 245 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 OR52N5Q8NH56 324 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 PRR14LQ5THK1 2151 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 MPIG6BO95866 241 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 PATE4P0C8F1 98 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 BAMBIQ13145 260 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 GLT8D1Q68CQ7 371 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 TIGD3Q6B0B8 471 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 CREB3L2Q70SY1 520 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 ANKRD37Q7Z713 158 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 RBP7Q96R05 134 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 HHLA2Q9UM44 414 aa11.93□□□□□ -0.5
MCF2L-213ENST00000421756 IGLV1-36A0A0B4J1U3 117 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 ANKRD20A5PA0PJZ0 165 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 C5orf63A6NC05 138 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 EEF1E1-BLOC1S5C9J1V9 151 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 TNFRSF10AO00220 468 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 FADS1O60427 444 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 ZNF254O75437 659 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 PNLIPRP2P54317 469 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 H2BFSP57053 126 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 IL10RAQ13651 578 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 METTL11BQ5VVY1 283 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 FAM57BQ71RH2 274 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 H1FNTQ75WM6 255 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-213ENST00000421756 KCTD20Q7Z5Y7 419 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 TMEM234Q8WY98 164 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 CCDC74BQ96LY2 380 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 GPX7Q96SL4 187 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-213ENST00000421756 GAREM1Q9H706 876 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 GPR27Q9NS67 375 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 MEIKINA0A087WXM9 373 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 HTR3BO95264 441 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 ECDO95905 644 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-213ENST00000421756 CYB5AP00167 134 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 HCKP08631 526 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 RAB40ALP0C0E4 278 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 SULT1A3P0DMM9 295 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 SULT1A4P0DMN0 295 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 GLI4P10075 376 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 CXCL2P19875 107 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 CXADRP78310 365 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 OPCMLQ14982 345 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 C3orf33Q6P1S2 294 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 ZNF283Q8N7M2 679 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 RAB40AQ8WXH6 277 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 ADAT3Q96EY9 351 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-213ENST00000421756 LIN37Q96GY3 246 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-213ENST00000421756 RBM24Q9BX46 236 aaKnown RBP11.92□□□□□ -0.5
MCF2L-213ENST00000421756 GPN1Q9HCN4 374 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-213ENST00000421756 COPZ2Q9P299 210 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 PTRH2Q9Y3E5 179 aaKnown RBP11.92□□□□□ -0.5
MCF2L-213ENST00000421756 SIT1Q9Y3P8 196 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 ICMTO60725 284 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 PMPCAQ10713 525 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 SMAD4Q13485 552 aaKnown RBP11.92□□□□□ -0.5
MCF2L-213ENST00000421756 C9orf135Q5VTT2 229 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 AWAT2Q6E213 333 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 OR6N1Q8NGY5 312 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 SLAMF6Q96DU3 332 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 NICN1Q9BSH3 213 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 CNTD2Q9H8S5 307 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 SCP2D1Q9UJQ7 156 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 SLC5A6Q9Y289 635 aa11.92□□□□□ -0.5
MCF2L-213ENST00000421756 LEUTXA8MZ59 168 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 XRCC3O43542 346 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 PMP2P02689 132 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 P2RX3P56373 397 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 DYRK1AQ13627 763 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 TOR2AQ5JU69 321 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 CFAP77Q6ZQR2 320 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 LIX1LQ8IVB5 337 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 FAM109AQ8N4B1 249 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 BPIFB2Q8N4F0 458 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 ZNF285Q96NJ3 590 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 SERINC1Q9NRX5 453 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 FREM1Q5H8C1 2179 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 LOC100289279A0A1B0GTE1 492 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 OR2T1O43869 369 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 IGLV3-19P01714 112 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 CLDN17P56750 224 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 DCDP81605 110 aaKnown RBP11.91□□□□□ -0.5
MCF2L-213ENST00000421756 C17orf67Q0P5P2 114 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 PPP1R3BQ86XI6 285 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 OR1J2Q8NGS2 313 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 LRRC20Q8TCA0 184 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 RNF128Q8TEB7 428 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 HLA-CQ95604 372 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 NARS2Q96I59 477 aaKnown RBP11.91□□□□□ -0.5
MCF2L-213ENST00000421756 PLEKHA1Q9HB21 404 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 SDHAF3Q9NRP4 125 aa11.91□□□□□ -0.5
MCF2L-213ENST00000421756 EIF4E2O60573 245 aaKnown RBP11.9□□□□□ -0.5
MCF2L-213ENST00000421756 ZNF43P17038 809 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms