RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 CXXC5Q7LFL8 322 aaKnown RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 ERI1Q8IV48 349 aaKnown RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 OR1J1Q8NGS3 322 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 BCL2L14Q9BZR8 327 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 HINT3Q9NQE9 182 aaKnown RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 H2AFY2Q9P0M6 372 aaPredicted RBP13.59□□□□□ -0.23
BRAT1-202ENST00000421712 DUSP13Q9UII6 198 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 KCNG2Q9UJ96 466 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 PDZD2O15018 2839 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 USF3Q68DE3 2245 aa13.59□□□□□ -0.23
BRAT1-202ENST00000421712 B9A039 149 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 SYNGR3O43761 229 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 ABHD16AO95870 558 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 ALPLP05186 524 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 GGT2P36268 569 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 ENTPD1P49961 510 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 RCN1Q15293 331 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 SLX4IPQ5VYV7 408 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 CFAP77Q6ZQR2 320 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 TCEANCQ8N8B7 351 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 OR6N2Q8NGY6 317 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 ABHD4Q8TB40 342 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 SLC7A6Q92536 515 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 ZMYND19Q96E35 227 aaPredicted RBP13.58□□□□□ -0.24
BRAT1-202ENST00000421712 C4orf45Q96LM5 186 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 INTS14Q96SY0 518 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 SYT3Q9BQG1 590 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 GABARAPL3Q9BY60 117 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 HDHD2Q9H0R4 259 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 ELOVL3Q9HB03 270 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 USE1Q9NZ43 259 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 CYB5R1Q9UHQ9 305 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 COMMD3-BMI1R4GMX3 469 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 ARID1AO14497 2285 aa13.58□□□□□ -0.24
BRAT1-202ENST00000421712 PRRC2AP48634 2157 aaKnown RBP13.57□□□□□ -0.24
BRAT1-202ENST00000421712 OR6C6A6NF89 314 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 M0R129 80 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 OVOL3O00110 214 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 PRKYO43930 277 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 WNT5AP41221 380 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 ERVS71-1P61550 626 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 APOFQ13790 326 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 TAF13Q15543 124 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 EFNB3Q15768 340 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 C12orf73Q69YU5 71 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 C11orf71Q6IPW1 123 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 DCXRQ7Z4W1 244 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 LRRC75A-AS1Q8N1F1 130 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 BBS1Q8NFJ9 593 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 IGFBPL1Q8WX77 278 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 MRPL24Q96A35 216 aaKnown RBP13.57□□□□□ -0.24
BRAT1-202ENST00000421712 IL4I1Q96RQ9 567 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 COQ7Q99807 217 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 VRK1Q99986 396 aaPredicted RBP13.57□□□□□ -0.24
BRAT1-202ENST00000421712 GSX2Q9BZM3 304 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 DYNLRB1Q9NP97 96 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 CENPMQ9NSP4 180 aa13.57□□□□□ -0.24
BRAT1-202ENST00000421712 A0A1W2PPW3 197 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 F5H5K5 113 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 PRODHO43272 600 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 DBHP09172 617 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 ANPEPP15144 967 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 GCH1P30793 250 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 HIST1H3AP68431 136 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 ECH1Q13011 328 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 EIF2B1Q14232 305 aaKnown RBP13.56□□□□□ -0.24
BRAT1-202ENST00000421712 LRRC36Q1X8D7 754 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 SWI5Q1ZZU3 235 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 MST1LQ2TV78 715 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 ZNF718Q3SXZ3 478 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 SLC35D3Q5M8T2 416 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 SPATA46Q5T0L3 261 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 HIST2H3PS2Q5TEC6 136 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 LINC01590Q5TEZ4 76 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 HIST2H3AQ71DI3 136 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 ZNF101Q8IZC7 436 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 SYNPRQ8TBG9 265 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 SLC29A1Q99808 456 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 ATF6BQ99941 703 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 MRPL37Q9BZE1 423 aaKnown RBP13.56□□□□□ -0.24
BRAT1-202ENST00000421712 ZNF701Q9NV72 531 aaPredicted RBP13.56□□□□□ -0.24
BRAT1-202ENST00000421712 IMPAD1Q9NX62 359 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 CCDC168Q8NDH2 2452 aa13.56□□□□□ -0.24
BRAT1-202ENST00000421712 NGFP01138 241 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 NAA10P41227 235 aaPredicted RBP13.55□□□□□ -0.24
BRAT1-202ENST00000421712 CDC42P60953 191 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 PPP1CBP62140 327 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 TRIP10Q15642 601 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 ALKBH6Q3KRA9 238 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 TEX30Q5JUR7 227 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 Q5PR19 223 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 LCN1P1Q5VSP4 162 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 SHEQ5VZ18 495 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 SPATC1Q76KD6 591 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 SHFQ7M4L6 423 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 DPY19L4Q7Z388 723 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 BCDIN3DQ7Z5W3 292 aaKnown RBP13.55□□□□□ -0.24
BRAT1-202ENST00000421712 LRP11Q86VZ4 500 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 GALNT4Q8N4A0 578 aa13.55□□□□□ -0.24
BRAT1-202ENST00000421712 SLC25A40Q8TBP6 338 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms