RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TMEM176BQ3YBM2 270 aaPredicted RBP12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 METTL11BQ5VVY1 283 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 LRFN4Q6PJG9 635 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GPAT4Q86UL3 456 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TMEM105Q8N8V8 129 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 OR52I2Q8NH67 350 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ATOH1Q92858 354 aaPredicted RBP12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 C20orf85Q9H1P6 137 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RANBP3Q9H6Z4 567 aaPredicted RBP12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 AUNIPQ9H7T9 357 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SLC22A13Q9Y226 551 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RCE1Q9Y256 329 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ALPK2Q86TB3 2170 aa12.95□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ZDBF2Q9HCK1 2354 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 C21orf140B9A014 251 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 P04436 131 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SERPINA7P05543 415 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ANXA3P12429 323 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CTSSP25774 331 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SRP9P49458 86 aaKnown RBP12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GSK3AP49840 483 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GABREP78334 506 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CD83Q01151 205 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 FAPQ12884 760 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TMEM164Q5U3C3 297 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PRAMEF20Q5VT98 475 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RAET1LQ5VY80 246 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 FOXL2NBQ6ZUU3 175 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ESPNLQ6ZVH7 1005 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PGAP1Q75T13 922 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ZFAND1Q8TCF1 268 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RNF170Q96K19 258 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SMAD5Q99717 465 aaKnown RBP12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GPR87Q9BY21 358 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 B3GNT4Q9C0J1 378 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CDCP1Q9H5V8 836 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ZNF160Q9HCG1 818 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 HRASLSQ9HDD0 168 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 FBLN5Q9UBX5 448 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GDF2Q9UK05 429 aaPredicted RBP12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 HRH3Q9Y5N1 445 aa12.94□□□□□ -0.34
HLA-DPA1-242ENST00000419277 A0A0A6YYJ9 748 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 A0A1B0GTH9 108 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 A0A1B0GVC2 190 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 A6NIN4 97 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ADRB1P08588 477 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SP9P0CG40 484 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CCL3P10147 92 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CPN1P15169 458 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CLDN12P56749 244 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RPS15P62841 145 aaKnown RBP12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GSG1Q2KHT4 349 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CCDC92Q53HC0 331 aaPredicted RBP12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RAB11FIP2Q7L804 512 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PPP1R32Q7Z5V6 425 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 LUZP2Q86TE4 346 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ESX1Q8N693 406 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ASCC1Q8N9N2 400 aaKnown RBP12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 OR5D14Q8NGL3 314 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CAPSLQ8WWF8 208 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ORAI1Q96D31 301 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 IP6K3Q96PC2 410 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 OR51J1Q9H342 316 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 NELFAQ9H3P2 528 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TMEM138Q9NPI0 162 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ING4Q9UNL4 249 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 A0A1W2PPL8 197 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 OR2M5A3KFT3 312 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 METTL21EPA6NDL7 271 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 NPIPA2E9PIF3 369 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 NPIPA3F8WFD2 350 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SYT7O43581 403 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 JMJD7P0C870 316 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 BDKRB2P30411 391 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SFTPDP35247 375 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 MAGEB1P43366 347 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CSNK1A1P48729 337 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SUCLG1P53597 346 aaKnown RBP12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 RBMS2Q15434 407 aaKnown RBP12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 PLA2G2CQ5R387 149 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 DNAAF1Q8NEP3 725 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 OR51D1Q8NGF3 324 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ASB13Q8WXK3 278 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 METTL17Q9H7H0 456 aaPredicted RBP12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 GPN1Q9HCN4 374 aaPredicted RBP12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CENPMQ9NSP4 180 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 LHFPL6Q9Y693 200 aa12.93□□□□□ -0.34
HLA-DPA1-242ENST00000419277 USP34Q70CQ2 3546 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 IGKV1D-43A0A0B4J1Z2 117 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 A0A1W2PNR3 127 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SNRPGP15A8MWD9 76 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 SHISA8B8ZZ34 492 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 MPZL1O95297 269 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 BPNT1O95861 308 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 TTRP02766 147 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 IL5P05113 134 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 ACSM4P0C7M7 580 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 MSR1P21757 451 aa12.92□□□□□ -0.34
HLA-DPA1-242ENST00000419277 CCL1P22362 96 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms