RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 ARPC2O15144 300 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 ARPC3O15145 178 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 RER1O15258 196 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 DOK2O60496 412 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 ABHD16AO95870 558 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 GPANK1O95872 356 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 CD55P08174 381 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 ANPEPP15144 967 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 SRP14P37108 136 aaKnown RBP15.15■□□□□ 0.02
CPNE1-210ENST00000416778 HTR5AP47898 357 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 HMGA2P52926 109 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 GNGT1P63211 74 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 RSPO1Q2MKA7 263 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-210ENST00000416778 SPATS1Q496A3 300 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 MTX3Q5HYI7 312 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 ACSM5Q6NUN0 579 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 C1orf94Q6P1W5 598 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 OR6V1Q8N148 313 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 OR51F2Q8NH61 342 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 OR1F12Q8NHA8 337 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 RAB1CQ92928 201 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 PTP4A1Q93096 173 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 NSMCE2Q96MF7 247 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 ERMAPQ96PL5 475 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-210ENST00000416778 DIRC2Q96SL1 478 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 EGLN1Q9GZT9 426 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 SRA1Q9HD15 236 aaKnown RBP15.15■□□□□ 0.02
CPNE1-210ENST00000416778 PLEK2Q9NYT0 353 aa15.15■□□□□ 0.02
CPNE1-210ENST00000416778 CGGBP1Q9UFW8 167 aaPredicted RBP15.15■□□□□ 0.02
CPNE1-210ENST00000416778 PURGQ9UJV8 347 aaKnown RBP15.15■□□□□ 0.02
CPNE1-210ENST00000416778 IGLV1-36A0A0B4J1U3 117 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 CLDN25C9JDP6 229 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 PLPP2O43688 288 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 PPP1R3DO95685 299 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 KITLGP21583 273 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 FPR3P25089 353 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 CRABP1P29762 137 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 GSSP48637 474 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 Q6ZR03 302 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 DEFB107AQ8IZN7 70 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 RFLNBQ8N5W9 214 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 NPEPL1Q8NDH3 523 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 MCUR1Q96AQ8 359 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 OR52D1Q9H346 318 aa15.14■□□□□ 0.01
CPNE1-210ENST00000416778 TRAV20A0A0B4J274 112 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 TIMM8AO60220 97 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-210ENST00000416778 OR10H3O60404 316 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 FABP3P05413 133 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 DBHP09172 617 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 GSTM3P21266 225 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 RRM2P31350 389 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 SPIBQ01892 262 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 DBPQ10586 325 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-210ENST00000416778 MEP1BQ16820 701 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 LIPNQ5VXI9 398 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 FAHD2BQ6P2I3 314 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-210ENST00000416778 C16orf89Q6UX73 402 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 RINLQ6ZS11 566 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 C1orf229Q6ZS94 237 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-210ENST00000416778 GJC3Q8NFK1 279 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 FAHD2AQ96GK7 314 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 TIMD4Q96H15 378 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 SAMD8Q96LT4 415 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 NMNAT3Q96T66 252 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 G6PC2Q9NQR9 355 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 METRNQ9UJH8 293 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 LHFPL6Q9Y693 200 aa15.13■□□□□ 0.01
CPNE1-210ENST00000416778 IDH3BO43837 385 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 DCTN3O75935 186 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 AVPP01185 164 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 IGHV2-5P01817 119 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 HIST1H1CP16403 213 aaKnown RBP15.12■□□□□ 0.01
CPNE1-210ENST00000416778 SLC6A6P31641 620 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 IFNGR2P38484 337 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 CENPAP49450 140 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 TNFAIP6P98066 277 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-210ENST00000416778 HNRNPA0Q13151 305 aaKnown RBP15.12■□□□□ 0.01
CPNE1-210ENST00000416778 ZMAT1Q5H9K5 638 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 LEG1Q6P5S2 330 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 ZBTB46Q86UZ6 589 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 ZDHHC21Q8IVQ6 265 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 OR4K13Q8NH42 304 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 GNPDA2Q8TDQ7 276 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 COG8Q96MW5 612 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 DCLRE1CQ96SD1 692 aaKnown RBP15.12■□□□□ 0.01
CPNE1-210ENST00000416778 DDOQ99489 341 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 C19orf24Q9BVV8 132 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 IFT27Q9BW83 186 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 ATPIF1Q9UII2 106 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 TMCC3Q9ULS5 477 aa15.12■□□□□ 0.01
CPNE1-210ENST00000416778 OR6C68A6NDL8 312 aa15.11■□□□□ 0.01
CPNE1-210ENST00000416778 KRT36O76013 467 aa15.11■□□□□ 0.01
CPNE1-210ENST00000416778 RAC2P15153 192 aa15.11■□□□□ 0.01
CPNE1-210ENST00000416778 RBMXP38159 391 aaKnown RBP15.11■□□□□ 0.01
CPNE1-210ENST00000416778 ERFP50548 548 aa15.11■□□□□ 0.01
CPNE1-210ENST00000416778 SLC3A1Q07837 685 aa15.11■□□□□ 0.01
CPNE1-210ENST00000416778 COX10Q12887 443 aa15.11■□□□□ 0.01
CPNE1-210ENST00000416778 TSPAN31Q12999 210 aa15.11■□□□□ 0.01
CPNE1-210ENST00000416778 KRTAP27-1Q3LI81 207 aa15.11■□□□□ 0.01
CPNE1-210ENST00000416778 PGBD2Q6P3X8 592 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms