RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 HGFACQ04756 655 aa17.7■□□□□ 0.42
PTPRU-203ENST00000415600 SNTB2Q13425 540 aaKnown RBP17.7■□□□□ 0.42
PTPRU-203ENST00000415600 GGTLC2Q14390 218 aa17.7■□□□□ 0.42
PTPRU-203ENST00000415600 NANOGNBQ7Z5D8 188 aa17.7■□□□□ 0.42
PTPRU-203ENST00000415600 DPPA2Q7Z7J5 298 aa17.7■□□□□ 0.42
PTPRU-203ENST00000415600 TEX12Q9BXU0 123 aa17.7■□□□□ 0.42
PTPRU-203ENST00000415600 ACOT13Q9NPJ3 140 aa17.7■□□□□ 0.42
PTPRU-203ENST00000415600 LRRN3E7EW58 273 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 KPNA4O00629 521 aaPredicted RBP17.69■□□□□ 0.42
PTPRU-203ENST00000415600 HLA-HP01893 362 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 NR4A2P43354 598 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 SNAPC1Q16533 368 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 ALDH16A1Q8IZ83 802 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 OR4Q3Q8NH05 313 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 TMEM163Q8TC26 289 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 FANK1Q8TC84 345 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 RORBQ92753 470 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 NMD3Q96D46 503 aaKnown RBP17.69■□□□□ 0.42
PTPRU-203ENST00000415600 BEX2Q9BXY8 128 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 OR52D1Q9H346 318 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 NOX3Q9HBY0 568 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 B3GNT2Q9NY97 397 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 GLTPQ9NZD2 209 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 COMMD3-BMI1R4GMX3 469 aa17.69■□□□□ 0.42
PTPRU-203ENST00000415600 EFCAB9A8MZ26 197 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 LY6HO94772 140 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 FADS2O95864 444 aaKnown RBP17.68■□□□□ 0.42
PTPRU-203ENST00000415600 NR4A1P22736 598 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 GSTT1P30711 240 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 MAP2K4P45985 399 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 EVX1P49640 407 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 TBCEQ15813 527 aaPredicted RBP17.68■□□□□ 0.42
PTPRU-203ENST00000415600 PHYHD1Q5SRE7 291 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 STX19Q8N4C7 294 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 OR2T33Q8NG76 320 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 FCGR1BQ92637 280 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 ISOC1Q96CN7 298 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 SLC25A44Q96H78 314 aaPredicted RBP17.68■□□□□ 0.42
PTPRU-203ENST00000415600 DOK1Q99704 481 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 SEC61A2Q9H9S3 476 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 PTTG2Q9NZH5 202 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 DNAJC27Q9NZQ0 273 aa17.68■□□□□ 0.42
PTPRU-203ENST00000415600 COL6A5A8TX70 2615 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 A0A1W2PRG6 482 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 HTR3EA5X5Y0 456 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 MCIDASD6RGH6 385 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 INMTO95050 263 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 BCL10O95999 233 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 IGHG1P01857 330 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 FAM157CP0CG43 387 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 OR8G3PP0DMU2 310 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 APEHP13798 732 aaKnown RBP17.67■□□□□ 0.42
PTPRU-203ENST00000415600 GP2P55259 537 aaKnown RBP17.67■□□□□ 0.42
PTPRU-203ENST00000415600 FXYD6P3P58550 94 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 RAB1AP62820 205 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 ST3GAL4Q11206 333 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 CLEC12AQ5QGZ9 265 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 SYT6Q5T7P8 510 aaPredicted RBP17.67■□□□□ 0.42
PTPRU-203ENST00000415600 OR52L1Q8NGH7 329 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 SAMD8Q96LT4 415 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 TSC22D3Q99576 134 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 SHARPINQ9H0F6 387 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 KCNS2Q9ULS6 477 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 SIGLEC7Q9Y286 467 aa17.67■□□□□ 0.42
PTPRU-203ENST00000415600 RPL36Q9Y3U8 105 aaKnown RBP17.67■□□□□ 0.42
PTPRU-203ENST00000415600 RTTNQ86VV8 2226 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 VWC2LB2RUY7 222 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 PTP4A3O75365 173 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 IGF2P01344 180 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 HMGN1P05114 100 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 SAGP10523 405 aaPredicted RBP17.66■□□□□ 0.42
PTPRU-203ENST00000415600 HNF1AP20823 631 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 C21orf33P30042 268 aaPredicted RBP17.66■□□□□ 0.42
PTPRU-203ENST00000415600 IRF3Q14653 427 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 UBE2UQ5VVX9 321 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 GPR107Q5VW38 600 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 FAM166AQ6J272 317 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 NHLRC1Q6VVB1 395 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 CXXC5Q7LFL8 322 aaKnown RBP17.66■□□□□ 0.42
PTPRU-203ENST00000415600 SPATA3Q8NHX4 192 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 TMEM54Q969K7 222 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 C1orf198Q9H425 327 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 TAS2R5Q9NYW4 299 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 ZNF503-AS2A6NEH8 195 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 CENPBD1B2RD01 187 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 BLOC1S5-TXNDC5H3BN57 136 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 SURF4O15260 269 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 PTHP01270 115 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 IGHV4-31P0DP07 118 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 DBTP11182 482 aaKnown RBP17.66■□□□□ 0.42
PTPRU-203ENST00000415600 NR2C1P13056 603 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 DAOP14920 347 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 ZNF14P17017 642 aaPredicted RBP17.66■□□□□ 0.42
PTPRU-203ENST00000415600 FUT1P19526 365 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 GRK5P34947 590 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 GLRXP35754 106 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 DAP3P51398 398 aaKnown RBP17.66■□□□□ 0.42
PTPRU-203ENST00000415600 ZNF84P51523 738 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 TMBIM6P55061 237 aa17.66■□□□□ 0.42
PTPRU-203ENST00000415600 CLRN1P58418 232 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms