RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 ELFN2Q5R3F8 820 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 TMEM154Q6P9G4 183 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 CORO6Q6QEF8 472 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 ARL9Q6T311 187 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 SPATA24Q86W54 205 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 CYB561A3Q8NBI2 242 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 ZNF540Q8NDQ6 660 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 SLC26A10Q8NG04 563 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 OR10G2Q8NGC3 310 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 OR1F12Q8NHA8 337 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 GIPC3Q8TF64 312 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 SNX33Q8WV41 574 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 IPCEF1Q8WWN9 437 aaPredicted RBP12.66□□□□□ -0.38
LIMS4-201ENST00000413601 TSSK6Q9BXA6 273 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 DGCR6LQ9BY27 220 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 CADM1Q9BY67 442 aaKnown RBP12.66□□□□□ -0.38
LIMS4-201ENST00000413601 RACGAP1Q9H0H5 632 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 POMPQ9Y244 141 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 GRIP1Q9Y3R0 1128 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 LHFPL6Q9Y693 200 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 TANC2Q9HCD6 1990 aa12.66□□□□□ -0.38
LIMS4-201ENST00000413601 OR6C6A6NF89 314 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 GNGT2O14610 69 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 TLX2O43763 284 aaPredicted RBP12.65□□□□□ -0.38
LIMS4-201ENST00000413601 HLA-DQA2P01906 255 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 TFP02787 698 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 IGHV4-31P0DP07 118 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 CCL8P80075 99 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 TEKQ02763 1124 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 RIN1Q13671 783 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 MOGQ16653 247 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 ZNF362Q5T0B9 420 aaPredicted RBP12.65□□□□□ -0.38
LIMS4-201ENST00000413601 MBNL2Q5VZF2 373 aaKnown RBP12.65□□□□□ -0.38
LIMS4-201ENST00000413601 TMEM179BQ7Z7N9 219 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 C1orf174Q8IYL3 243 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 LNX2Q8N448 690 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 OR4Q3Q8NH05 313 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 DDOQ99489 341 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 FEVQ99581 238 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 NIPSNAP1Q9BPW8 284 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 POFUT1Q9H488 388 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 ARMC1Q9NVT9 282 aa12.65□□□□□ -0.38
LIMS4-201ENST00000413601 TCRBV3S1A0A5B6 114 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 LRP5LA4QPB2 252 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 DBHP09172 617 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 PYCR1P32322 319 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 HIST1H3AP68431 136 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 GK3PQ14409 553 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 C6orf52Q5T4I8 152 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 HIST2H3PS2Q5TEC6 136 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 CYB5R2Q6BCY4 276 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 HIST2H3AQ71DI3 136 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 LINC00346Q8IVM7 164 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 GJC3Q8NFK1 279 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 ZNRF4Q8WWF5 429 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 RDH5Q92781 318 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 YIPF5Q969M3 257 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 TBCCD1Q9NVR7 557 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 PDP1Q9P0J1 537 aaPredicted RBP12.64□□□□□ -0.39
LIMS4-201ENST00000413601 STARD10Q9Y365 291 aa12.64□□□□□ -0.39
LIMS4-201ENST00000413601 DYSFO75923 2080 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 A8MV72 311 aaPredicted RBP12.63□□□□□ -0.39
LIMS4-201ENST00000413601 H3BSA7 217 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 CDC14BO60729 498 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 LILRA1O75019 489 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 FKBP6O75344 327 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 MT-ND5P03915 603 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 ZNF16P17020 682 aaPredicted RBP12.63□□□□□ -0.39
LIMS4-201ENST00000413601 ZNF23P17027 643 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 HOXB6P17509 224 aaKnown RBP12.63□□□□□ -0.39
LIMS4-201ENST00000413601 ACHEP22303 614 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 GGT2P36268 569 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 ZNF81P51508 661 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 MMP15P51511 669 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 CBX1P83916 185 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 COX10Q12887 443 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 PSG7Q13046 419 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 TRIP10Q15642 601 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 TSTQ16762 297 aaKnown RBP12.63□□□□□ -0.39
LIMS4-201ENST00000413601 PCGF3Q3KNV8 242 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 SLC36A3Q495N2 470 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 SLC18B1Q6NT16 456 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 CD300LDQ6UXZ3 194 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 CFAP77Q6ZQR2 320 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 HS3ST5Q8IZT8 346 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 SLC37A3Q8NCC5 494 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 PROKR2Q8NFJ6 384 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 OR2T33Q8NG76 320 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 OR51L1Q8NGJ5 315 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 OR9Q1Q8NGQ5 310 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 OR2T4Q8NH00 348 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 SLCO4A1Q96BD0 722 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 CDADC1Q9BWV3 514 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 CHODLQ9H9P2 273 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 ZNF275Q9NSD4 429 aaPredicted RBP12.63□□□□□ -0.39
LIMS4-201ENST00000413601 MRPL22Q9NWU5 206 aaKnown RBP12.63□□□□□ -0.39
LIMS4-201ENST00000413601 NKIRAS2Q9NYR9 191 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 BAIAP2Q9UQB8 552 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
LIMS4-201ENST00000413601 PLSCR5A0PG75 271 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms