RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TNFP01375 233 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 HOXB1P14653 301 aaPredicted RBP15.82■□□□□ 0.12
SDCBP-202ENST00000413219 TBPP20226 339 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 B2MP61769 119 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 ACKR1Q16570 336 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 NKPD1Q17RQ9 610 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 TMEM240Q5SV17 173 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 FJX1Q86VR8 437 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 SPAG16Q8N0X2 631 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 JAGN1Q8N5M9 183 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 OR4S1Q8NGB4 309 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 OR51A2Q8NGJ7 313 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 MRGPRFQ96AM1 343 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 CDC6Q99741 560 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 GAL3ST1Q99999 423 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 TXNIPQ9H3M7 391 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 MKL2Q9ULH7 1088 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 RHBDD3Q9Y3P4 386 aa15.82■□□□□ 0.12
SDCBP-202ENST00000413219 SMAD9O15198 467 aaKnown RBP15.81■□□□□ 0.12
SDCBP-202ENST00000413219 ZNF208O43345 1280 aa15.81■□□□□ 0.12
SDCBP-202ENST00000413219 STK17BO94768 372 aa15.81■□□□□ 0.12
SDCBP-202ENST00000413219 IGHMP01871 453 aa15.81■□□□□ 0.12
SDCBP-202ENST00000413219 ADCYAP1P18509 176 aa15.81■□□□□ 0.12
SDCBP-202ENST00000413219 PSMB6P28072 239 aa15.81■□□□□ 0.12
SDCBP-202ENST00000413219 ZNF704Q6ZNC4 412 aaPredicted RBP15.81■□□□□ 0.12
SDCBP-202ENST00000413219 TRAPPC6BQ86SZ2 158 aa15.81■□□□□ 0.12
SDCBP-202ENST00000413219 CD163Q86VB7 1156 aa15.81■□□□□ 0.12
SDCBP-202ENST00000413219 OR4K17Q8NGC6 315 aa15.81■□□□□ 0.12
SDCBP-202ENST00000413219 ZMAT3Q9HA38 289 aaKnown RBP15.81■□□□□ 0.12
SDCBP-202ENST00000413219 FITM1A5D6W6 292 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 DBX1A6NMT0 343 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 SCGNO76038 276 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 CSN2P05814 226 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 CRHP06850 196 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 PVALBP20472 110 aaPredicted RBP15.8■□□□□ 0.12
SDCBP-202ENST00000413219 AKT2P31751 481 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 SPOCK1Q08629 439 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 GUCA2BQ16661 112 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 FAM160A2Q8N612 972 aaPredicted RBP15.8■□□□□ 0.12
SDCBP-202ENST00000413219 AVL9Q8NBF6 648 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 FAM46BQ96A09 425 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 SLC46A1Q96NT5 459 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 CHMP1AQ9HD42 196 aaPredicted RBP15.8■□□□□ 0.12
SDCBP-202ENST00000413219 TMED7Q9Y3B3 224 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 LOC107986453A0A1B0GWG9 222 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 PQLC2LA1A4F0 135 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 OR2W5A6NFC9 320 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 FRG2CA6NGY1 282 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 FAM25EA8MYX2 175 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 RAB27BO00194 218 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 EFSO43281 561 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 FADS1O60427 444 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 LIPCP11150 499 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 CTLA4P16410 223 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 CX3CR1P49238 355 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 SLC37A1P57057 533 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 TAS2R31P59538 309 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 CYCSP99999 105 aaKnown RBP15.8■□□□□ 0.12
SDCBP-202ENST00000413219 ZNF117Q03924 483 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 TMEM244Q5VVB8 128 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 OR10K2Q6IF99 312 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 DTWD2Q8NBA8 298 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 ACBD4Q8NC06 268 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 RNF141Q8WVD5 230 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 FOXN4Q96NZ1 517 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 KLHDC3Q9BQ90 382 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 NMES1Q9C002 83 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 NXF5Q9H1B4 397 aaKnown RBP15.8■□□□□ 0.12
SDCBP-202ENST00000413219 ATPIF1Q9UII2 106 aa15.8■□□□□ 0.12
SDCBP-202ENST00000413219 WIPF3A6NGB9 483 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 C17orf105B2RV13 164 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 DXOO77932 396 aaKnown RBP15.79■□□□□ 0.12
SDCBP-202ENST00000413219 SNAPINO95295 136 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 CRABP1P29762 137 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 AVPR2P30518 371 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 RFC3P40938 356 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 CBX5P45973 191 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 GSK3AP49840 483 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 RAB13P51153 203 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 HYAL4Q2M3T9 481 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 OTPQ5XKR4 325 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 UNQ6126/PRO20091Q6UXV3 157 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 SFTPA2Q8IWL1 248 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 BAP18Q8IXM2 172 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 CNTNAP3BQ96NU0 1288 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 NUDT16L1Q9BRJ7 211 aaKnown RBP15.79■□□□□ 0.12
SDCBP-202ENST00000413219 G6PC2Q9NQR9 355 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 BIN3Q9NQY0 253 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 OR52A1Q9UKL2 312 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 LRP4O75096 1905 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 SPTBP11277 2137 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 ARHGEF17Q96PE2 2063 aaPredicted RBP15.79■□□□□ 0.12
SDCBP-202ENST00000413219 F8W036 122 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 PRKNO60260 465 aaPredicted RBP15.79■□□□□ 0.12
SDCBP-202ENST00000413219 ERCC1P07992 297 aaPredicted RBP15.79■□□□□ 0.12
SDCBP-202ENST00000413219 BLOC1S1P78537 153 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 S100A12P80511 92 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 GLO1Q04760 184 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 GPM6BQ13491 265 aa15.79■□□□□ 0.12
SDCBP-202ENST00000413219 C1QL3Q5VWW1 255 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms