RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TBC1D28Q2M2D7 210 aa17.91■□□□□ 0.46
C4orf48-202ENST00000409860 CPEB3Q8NE35 698 aaKnown RBP17.91■□□□□ 0.46
C4orf48-202ENST00000409860 ST7LQ8TDW4 575 aa17.91■□□□□ 0.46
C4orf48-202ENST00000409860 THEM6Q8WUY1 208 aa17.91■□□□□ 0.46
C4orf48-202ENST00000409860 PIK3IP1Q96FE7 263 aa17.91■□□□□ 0.46
C4orf48-202ENST00000409860 COQ7Q99807 217 aa17.91■□□□□ 0.46
C4orf48-202ENST00000409860 ABHD6Q9BV23 337 aa17.91■□□□□ 0.46
C4orf48-202ENST00000409860 CDH20Q9HBT6 801 aa17.91■□□□□ 0.46
C4orf48-202ENST00000409860 PCDHGB1Q9Y5G3 927 aa17.91■□□□□ 0.46
C4orf48-202ENST00000409860 IRGMA1A4Y4 181 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 OR6C6A6NF89 314 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 A6NNC1 897 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 ZNF670-ZNF695F2Z2N8 137 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 DENRO43583 198 aaKnown RBP17.9■□□□□ 0.46
C4orf48-202ENST00000409860 CRYAAP02489 173 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 ACTC1P68032 377 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 ACTA1P68133 377 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 NAAAQ02083 359 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 RAB40BQ12829 278 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 KLHL22Q53GT1 634 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 MYPOPQ86VE0 399 aaPredicted RBP17.9■□□□□ 0.46
C4orf48-202ENST00000409860 OR10H4Q8NGA5 316 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 OR4F15Q8NGB8 312 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 SMAP2Q8WU79 429 aaPredicted RBP17.9■□□□□ 0.46
C4orf48-202ENST00000409860 ASB17Q8WXJ9 295 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 LGALS12Q96DT0 336 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 SLAMF6Q96DU3 332 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 ATF6BQ99941 703 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 PNRC2Q9NPJ4 139 aaKnown RBP17.9■□□□□ 0.46
C4orf48-202ENST00000409860 COL12A1Q99715 3063 aa17.9■□□□□ 0.46
C4orf48-202ENST00000409860 ADGRG4Q8IZF6 3080 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 ZNF878C9JN71 531 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 ABCD4O14678 606 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 SIAH2O43255 324 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 FAM20BO75063 409 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 FADS2O95864 444 aaKnown RBP17.89■□□□□ 0.45
C4orf48-202ENST00000409860 OR2T7P0C7T2 308 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 ALOX5APP20292 161 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 HCCSP53701 268 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 CSNK2BP67870 215 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 TAF13Q15543 124 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 C6orf141Q5SZD1 244 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 PIAS4Q8N2W9 510 aaPredicted RBP17.89■□□□□ 0.45
C4orf48-202ENST00000409860 OR2T27Q8NH04 317 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 COPS4Q9BT78 406 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 CENPMQ9NSP4 180 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 DDX28Q9NUL7 540 aaKnown RBP17.89■□□□□ 0.45
C4orf48-202ENST00000409860 MRPS18AQ9NVS2 196 aaKnown RBP17.89■□□□□ 0.45
C4orf48-202ENST00000409860 EXOGQ9Y2C4 368 aaKnown RBP17.89■□□□□ 0.45
C4orf48-202ENST00000409860 KLHDC2Q9Y2U9 406 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 RNF115Q9Y4L5 304 aa17.89■□□□□ 0.45
C4orf48-202ENST00000409860 IGHV2OR16-5A0A0B4J2B6 119 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 C5orf49A4QMS7 147 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 CCNOP22674 350 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 SLC15A1P46059 708 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 CXCR4P61073 352 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 LAIR2Q6ISS4 152 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 KCTD18Q6PI47 426 aaPredicted RBP17.88■□□□□ 0.45
C4orf48-202ENST00000409860 SPATC1Q76KD6 591 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 BPIFB6Q8NFQ5 453 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 OR10S1Q8NGN2 331 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 RNF133Q8WVZ7 376 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 RADILQ96JH8 1075 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 POM121L2Q96KW2 1035 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 TBX5Q99593 518 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 PLCXD1Q9NUJ7 323 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 COPS3Q9UNS2 423 aa17.88■□□□□ 0.45
C4orf48-202ENST00000409860 PRR14LQ5THK1 2151 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 LOC100509620A0A075B734 347 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 EFCAB10A6NFE3 127 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 CCL2P13500 99 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 GRB2P62993 217 aaKnown RBP17.87■□□□□ 0.45
C4orf48-202ENST00000409860 GALK2Q01415 458 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 SPOCK1Q08629 439 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 SLC22A25Q6T423 547 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 ZNF322Q6U7Q0 402 aaPredicted RBP17.87■□□□□ 0.45
C4orf48-202ENST00000409860 RHOUQ7L0Q8 258 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 IPCEF1Q8WWN9 437 aaPredicted RBP17.87■□□□□ 0.45
C4orf48-202ENST00000409860 SPTSSAQ969W0 71 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 DCLRE1CQ96SD1 692 aaKnown RBP17.87■□□□□ 0.45
C4orf48-202ENST00000409860 AMELYQ99218 206 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 SCN3BQ9NY72 215 aa17.87■□□□□ 0.45
C4orf48-202ENST00000409860 A0A1W2PQL4 384 aaPredicted RBP17.86■□□□□ 0.45
C4orf48-202ENST00000409860 ATP6V1G2-DDX39BF2Z307 99 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 SLC1A7O00341 560 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 XPNPEP2O43895 674 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 H2BFMP0C1H6 154 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 ZNF35P13682 527 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 LOXP28300 417 aaPredicted RBP17.86■□□□□ 0.45
C4orf48-202ENST00000409860 CALCRP30988 508 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 OPRL1P41146 370 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 MED21Q13503 144 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 ADAM5Q6NVV9 412 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 ARL9Q6T311 187 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 KRT77Q7Z794 578 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.86■□□□□ 0.45
C4orf48-202ENST00000409860 ACBD7Q8N6N7 88 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 OR52I1Q8NGK6 324 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 SLC7A6Q92536 515 aa17.86■□□□□ 0.45
C4orf48-202ENST00000409860 HS3ST6Q96QI5 342 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms