RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 VEZF1Q14119 521 aa7.68□□□□□ -1.18
SCN9A-203ENST00000409672 DUSP5Q16690 384 aa7.68□□□□□ -1.18
SCN9A-203ENST00000409672 TMEM182Q6ZP80 229 aaPredicted RBP7.68□□□□□ -1.18
SCN9A-203ENST00000409672 OR56B4Q8NH76 319 aa7.68□□□□□ -1.18
SCN9A-203ENST00000409672 PECRQ9BY49 303 aa7.68□□□□□ -1.18
SCN9A-203ENST00000409672 IGKV3D-15A0A087WSY6 115 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 LOC285095A0A1B0GVY8 99 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 CLDN24A6NM45 220 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 TMEM212A6NML5 194 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 DRGXA6NNA5 263 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 IGKV3-15P01624 115 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 BAMBIQ13145 260 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SMN1Q16637 294 aaKnown RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 PLAG1Q6DJT9 500 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SLC16A11Q8NCK7 471 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SOX7Q9BT81 388 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 CRYABP02511 175 aaKnown RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 C16orf47Q6ZP98 133 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 DOK3Q7L591 496 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 OR56B1Q8NGI3 324 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SLC29A1Q99808 456 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 CXorf36Q9H7Y0 433 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 DBX1A6NMT0 343 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 KLKB1P03952 638 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 ATXN1LP0C7T5 689 aaKnown RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SELEP16581 610 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 RPL7P18124 248 aaKnown RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SOX8P57073 446 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 C1orf220Q5T0J3 134 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 ZNF788Q6ZQV5 615 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 DTWD2Q8NBA8 298 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 NANPQ8TBE9 248 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SFT2D1Q8WV19 159 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 GHSRQ92847 366 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 FER1L5A0AVI2 2057 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 TYROBPO43914 113 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 ALKAL2Q6UX46 152 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 FNDC8Q8TC99 324 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SLC7A6Q92536 515 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 PLA2G2FQ9BZM2 168 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 NT5DC2Q9H857 520 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SLC25A22Q9H936 323 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 DOK5Q9P104 306 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 TAAR3PQ9P1P4 343 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 HS3ST3A1Q9Y663 406 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 TMEM82A0PJX8 343 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SLC22A23A1A5C7 686 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 FITM1A5D6W6 292 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 HYAL3O43820 417 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 COX7A2P2O60397 106 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 B4GALT3O60512 393 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 CCDC28AQ8IWP9 274 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 TAAR9Q96RI9 348 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 THAP10Q9P2Z0 257 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 RNASE1P07998 156 aaKnown RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 ARR3P36575 388 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 CSNK1G2P78368 415 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 IHHQ14623 411 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 BTNL3Q6UXE8 466 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SLC15A4Q8N697 577 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 OR6T1Q8NGN1 323 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 COMMD5Q9GZQ3 224 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SLC17A4Q9Y2C5 497 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 NRASP01111 189 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 PENKP01210 267 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 PI3P19957 117 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 NPY1RP25929 384 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 GABRB3P28472 473 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 CYP4V2Q6ZWL3 525 aaPredicted RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 TSEN54Q7Z6J9 526 aaKnown RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 CCDC190Q86UF4 302 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 WDR5BQ86VZ2 330 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 RTTNQ86VV8 2226 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 ITGB4P16144 1822 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 IGHV3-43A0A0B4J1X8 118 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 IGHV3-43DP0DP04 118 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 LAP3P28838 519 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SRP9P49458 86 aaKnown RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 MAP2K6P52564 334 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 RPS25P62851 125 aaKnown RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 ACSM1Q08AH1 577 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 HAGHQ16775 308 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 RBM45Q8IUH3 476 aaKnown RBP7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SKA3Q8IX90 412 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 NUDT9Q9BW91 350 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 ZFP57Q9NU63 452 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 GAB2Q9UQC2 676 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 SLCO1B1Q9Y6L6 691 aa7.67□□□□□ -1.18
SCN9A-203ENST00000409672 TMPRSS2O15393 492 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 IGFBP6P24592 240 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 SNTB1Q13884 538 aaKnown RBP7.66□□□□□ -1.18
SCN9A-203ENST00000409672 LAIR1Q6GTX8 287 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 PLPP5Q8NEB5 264 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 LMO3Q8TAP4 145 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 LINC00052Q96N35 136 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 HSD3B7Q9H2F3 369 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 TMEM181Q9P2C4 612 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 TRAPPC4Q9Y296 219 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 CCL21O00585 134 aa7.66□□□□□ -1.18
SCN9A-203ENST00000409672 GPANK1O95872 356 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms