RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 OR51G2Q8NGK0 314 aa6.64□□□□□ -1.35
SCN9A-202ENST00000409435 HINT2Q9BX68 163 aa6.64□□□□□ -1.35
SCN9A-202ENST00000409435 NOX3Q9HBY0 568 aa6.64□□□□□ -1.35
SCN9A-202ENST00000409435 ACOXLQ9NUZ1 547 aa6.64□□□□□ -1.35
SCN9A-202ENST00000409435 ADAMTS6Q9UKP5 1117 aa6.64□□□□□ -1.35
SCN9A-202ENST00000409435 DAPP1Q9UN19 280 aa6.64□□□□□ -1.35
SCN9A-202ENST00000409435 SLCO1B1Q9Y6L6 691 aa6.64□□□□□ -1.35
SCN9A-202ENST00000409435 EVPLQ92817 2033 aa6.64□□□□□ -1.35
SCN9A-202ENST00000409435 CD300LBA8K4G0 201 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 WNT1P04628 370 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 FUT1P19526 365 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 S100A11P31949 105 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 MAGEA5P43359 124 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 ZNF74Q16587 644 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 CYP1B1Q16678 543 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 BTNL8Q6UX41 500 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 MEX3DQ86XN8 651 aaKnown RBP6.63□□□□□ -1.35
SCN9A-202ENST00000409435 GPR119Q8TDV5 335 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 ZFP90Q8TF47 636 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 LRRC3BQ96PB8 259 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 MYOTQ9UBF9 498 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 PPP1R3CQ9UQK1 317 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 H3BSH0 61 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 SLC31A2O15432 143 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 HMGN2P05204 90 aaKnown RBP6.63□□□□□ -1.35
SCN9A-202ENST00000409435 CST2P09228 141 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 FGF5P12034 268 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 SOX18P35713 384 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 PPICP45877 212 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 CDK5Q00535 292 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 TCF15Q12870 199 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 OR4D1Q15615 310 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 C18orf63Q68DL7 685 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 GRINAQ7Z429 371 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 MDGA2Q7Z553 956 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 UBAC2Q8NBM4 344 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 OLIG1Q8TAK6 271 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 FAM213BQ8TBF2 198 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 ADAMTS16Q8TE57 1224 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 METTL17Q9H7H0 456 aaPredicted RBP6.63□□□□□ -1.35
SCN9A-202ENST00000409435 MYEF2Q9P2K5 600 aaKnown RBP6.63□□□□□ -1.35
SCN9A-202ENST00000409435 TESQ9UGI8 421 aaKnown RBP6.63□□□□□ -1.35
SCN9A-202ENST00000409435 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 LRIT2A6NDA9 550 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 ZNF195O14628 629 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 TNFSF12O43508 249 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 SPRY3O43610 288 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 NDUFB3O43676 98 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 TBX19O60806 448 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 NTF3P20783 257 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 RAB13P51153 203 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 IL13RA1P78552 427 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 ZNF658BQ4V348 819 aaPredicted RBP6.63□□□□□ -1.35
SCN9A-202ENST00000409435 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.63□□□□□ -1.35
SCN9A-202ENST00000409435 SLC6A19Q695T7 634 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 SP5Q6BEB4 398 aaPredicted RBP6.63□□□□□ -1.35
SCN9A-202ENST00000409435 TRNP1Q6NT89 227 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 C6orf89Q6UWU4 347 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 OR8J1Q8NGP2 316 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 SEC22CQ9BRL7 303 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 GSX2Q9BZM3 304 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 RAB18Q9NP72 206 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 GOLT1BQ9Y3E0 138 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 CORINQ9Y5Q5 1042 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 CEPT1Q9Y6K0 416 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 URGCP-MRPS24S4R325 110 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 TERTO14746 1132 aaKnown RBP6.63□□□□□ -1.35
SCN9A-202ENST00000409435 ADAM11O75078 769 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 SOX14O95416 240 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 GM2AP17900 193 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 PTAFRP25105 342 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 PTBP1P26599 531 aaKnown RBP eCLIP6.63□□□□□ -1.359e-8■■■□□ 15.4
SCN9A-202ENST00000409435 DDOSTP39656 456 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 ERVK-16P61578 105 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 GPR176Q14439 515 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 PRR18Q8N4B5 295 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 OR6S1Q8NH40 331 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 OR5W2Q8NH69 310 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 FGGYQ96C11 551 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 MS4A8Q9BY19 250 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 LPAR2Q9HBW0 351 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 A0A1B0GUL6 1792 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 TRAV36DV7A0A075B6V5 113 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 AHRRA9YTQ3 701 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 CDC14BO60729 498 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 UBL3O95164 117 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 FAM157BP0CG42 384 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 NME2P22392 152 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 PNLIPRP2P54317 469 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 DNAJB13P59910 316 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 KCNJ10P78508 379 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 OR2T2Q6IF00 324 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 ESPNLQ6ZVH7 1005 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 KLHDC8BQ8IXV7 354 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 MARVELD3Q96A59 401 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 UPRTQ96BW1 309 aa6.63□□□□□ -1.35
SCN9A-202ENST00000409435 TEX50A0A1B0GTY4 177 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 ZNF736B4DX44 427 aaPredicted RBP6.62□□□□□ -1.35
SCN9A-202ENST00000409435 FAAHO00519 579 aa6.62□□□□□ -1.35
SCN9A-202ENST00000409435 GAPDHSO14556 408 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms