RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 DCAF12L2Q5VW00 463 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 OR52W1Q6IF63 320 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 TMEM65Q6PI78 240 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 HDDC2Q7Z4H3 204 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 HGDQ93099 445 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 MARC2Q969Z3 335 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 LINC00052Q96N35 136 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 LMF2Q9BU23 707 aaKnown RBP12.04□□□□□ -0.48
COL6A2-204ENST00000409416 GAREM1Q9H706 876 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 GSKIPQ9P0R6 139 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 PCOLCE2Q9UKZ9 415 aa12.04□□□□□ -0.48
COL6A2-204ENST00000409416 CEP295Q9C0D2 2601 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 TRAV20A0A0B4J274 112 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 CCDC163A0A0D9SF12 145 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 RPS10-NUDT3A0A1W2PQS6 291 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 F5H5P2 479 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 ADAM10O14672 748 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 ZNF354AO60765 605 aaPredicted RBP12.03□□□□□ -0.48
COL6A2-204ENST00000409416 ITGA5P08648 1049 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 CSF2RBP32927 897 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 PRSS3P35030 304 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 NUP62P37198 522 aaPredicted RBP12.03□□□□□ -0.48
COL6A2-204ENST00000409416 MAP2K6P52564 334 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 RAB11BQ15907 218 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 WDR38Q5JTN6 314 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 SLC35D3Q5M8T2 416 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 C1orf140Q5VVS0 124 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 BRICD5Q6PL45 260 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 NUDCD2Q8WVJ2 157 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 MRPS17Q9Y2R5 130 aaKnown RBP12.03□□□□□ -0.48
COL6A2-204ENST00000409416 IGHV1OR21-1A0A087WYE8 117 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 ARPC3O15145 178 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 ZNF217O75362 1048 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 TGM6O95932 706 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 RIDAP52758 137 aaKnown RBP12.03□□□□□ -0.48
COL6A2-204ENST00000409416 SLC37A1P57057 533 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 RAP2BP61225 183 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 SCRN3Q0VDG4 424 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 ZNF141Q15928 474 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 NKAIN1Q4KMZ8 207 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 FAM74A1Q5RGS3 127 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 OLFML2AQ68BL7 652 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 MUC20Q8N307 709 aaPredicted RBP12.03□□□□□ -0.48
COL6A2-204ENST00000409416 TRAF4Q9BUZ4 470 aaPredicted RBP12.03□□□□□ -0.48
COL6A2-204ENST00000409416 TAS2R5Q9NYW4 299 aa12.03□□□□□ -0.48
COL6A2-204ENST00000409416 FAM221AA4D161 298 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 C5orf51A6NDU8 294 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 UPK3AO75631 287 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 PIAS2O75928 621 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 NDUFB6O95139 128 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 AKR1C2P52895 323 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 AKR1C1Q04828 323 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 MFGE8Q08431 387 aaPredicted RBP12.02□□□□□ -0.48
COL6A2-204ENST00000409416 FOXF1Q12946 379 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 BAMBIQ13145 260 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 SERTAD2Q14140 314 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 RBMS2Q15434 407 aaKnown RBP12.02□□□□□ -0.48
COL6A2-204ENST00000409416 C2orf76Q3KRA6 126 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 SLC25A45Q8N413 288 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 MAFAQ8NHW3 353 aaPredicted RBP12.02□□□□□ -0.48
COL6A2-204ENST00000409416 OR2S2Q9NQN1 319 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 STEAP1Q9UHE8 339 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 GPN3Q9UHW5 284 aaPredicted RBP12.02□□□□□ -0.48
COL6A2-204ENST00000409416 RARRES3Q9UL19 164 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 FREM1Q5H8C1 2179 aa12.02□□□□□ -0.48
COL6A2-204ENST00000409416 ZNF726A6NNF4 738 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 MBTPS2O43462 519 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 APOC3P02656 99 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 PNMTP11086 282 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 CCL4P13236 92 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 DLX5P56178 289 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 HSD17B7P56937 341 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 GGTLC2Q14390 218 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 ZNF704Q6ZNC4 412 aaPredicted RBP12.02□□□□□ -0.49
COL6A2-204ENST00000409416 TMUB2Q71RG4 321 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 FAM3DQ96BQ1 224 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 RADILQ96JH8 1075 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 MFFQ9GZY8 342 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 THADAQ6YHU6 1953 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 GLSO94925 669 aaPredicted RBP12.02□□□□□ -0.49
COL6A2-204ENST00000409416 PNPP00491 289 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 IFNA6P05013 189 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 SEC61A1P61619 476 aaKnown RBP12.02□□□□□ -0.49
COL6A2-204ENST00000409416 CCL7P80098 99 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 ELP2Q6IA86 826 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 UNQ9370/PRO34162Q6UXP9 181 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 SOX7Q9BT81 388 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 OCIAD1Q9NX40 245 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 ABCA4P78363 2273 aa12.02□□□□□ -0.49
COL6A2-204ENST00000409416 hCG_1807616A0A1W2PRN6 198 aa12.01□□□□□ -0.49
COL6A2-204ENST00000409416 GGT3PA6NGU5 568 aa12.01□□□□□ -0.49
COL6A2-204ENST00000409416 CTDSPLO15194 276 aa12.01□□□□□ -0.49
COL6A2-204ENST00000409416 RRASP10301 218 aa12.01□□□□□ -0.49
COL6A2-204ENST00000409416 NME1P15531 152 aaKnown RBP12.01□□□□□ -0.49
COL6A2-204ENST00000409416 S100A11P31949 105 aa12.01□□□□□ -0.49
COL6A2-204ENST00000409416 STARP49675 285 aa12.01□□□□□ -0.49
COL6A2-204ENST00000409416 AFF3P51826 1226 aaKnown RBP12.01□□□□□ -0.49
COL6A2-204ENST00000409416 RAG2P55895 527 aa12.01□□□□□ -0.49
COL6A2-204ENST00000409416 H2BFSP57053 126 aa12.01□□□□□ -0.49
COL6A2-204ENST00000409416 GVQW1Q8N7I0 195 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms