RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CATSPERDQ86XM0 798 aa22.77■■□□□ 1.24
SPIRE1-202ENST00000409402 NANPQ8TBE9 248 aa22.77■■□□□ 1.24
SPIRE1-202ENST00000409402 KIAA1456Q9P272 454 aa22.77■■□□□ 1.24
SPIRE1-202ENST00000409402 PPM1DO15297 605 aa22.77■■□□□ 1.23
SPIRE1-202ENST00000409402 FABP1P07148 127 aa22.77■■□□□ 1.23
SPIRE1-202ENST00000409402 HOXC4P09017 264 aaPredicted RBP22.77■■□□□ 1.23
SPIRE1-202ENST00000409402 RAC1P63000 192 aa22.77■■□□□ 1.23
SPIRE1-202ENST00000409402 EGR3Q06889 387 aa22.77■■□□□ 1.23
SPIRE1-202ENST00000409402 PHLDA2Q53GA4 152 aa22.77■■□□□ 1.23
SPIRE1-202ENST00000409402 RBMS3Q6XE24 437 aaKnown RBP22.77■■□□□ 1.23
SPIRE1-202ENST00000409402 RPA2P15927 270 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 NXPH1P58417 271 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 TFF2Q03403 129 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 CNTNAP3Q9BZ76 1288 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 TGM6O95932 706 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 SUB1P53999 127 aaKnown RBP eCLIP22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 FXNQ16595 210 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 LGI3Q8N145 548 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 FAM26EQ8N5C1 309 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 HINT3Q9NQE9 182 aaKnown RBP22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 LAMA4Q16363 1823 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 NLRC3Q7RTR2 1065 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 ADGRF3Q8IZF5 1079 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 PLA2G3Q9NZ20 509 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 PPIL1Q9Y3C6 166 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 IGHV1OR21-1A0A087WYE8 117 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 POU3F3P20264 500 aaPredicted RBP22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 AADACP22760 399 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 TRILQ7L0X0 811 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 H2BFWTQ7Z2G1 175 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 OR13F1Q8NGS4 319 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 METTL17Q9H7H0 456 aaPredicted RBP22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 ANKRD12Q6UB98 2062 aa22.76■■□□□ 1.23
SPIRE1-202ENST00000409402 INSM1Q01101 510 aaPredicted RBP22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 SIRPB1O00241 398 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 PRSS36Q5K4E3 855 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 GPBAR1Q8TDU6 330 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 ZNF436Q9C0F3 470 aaPredicted RBP22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 RAB27BO00194 218 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 DHHO43323 396 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 POU2F2P09086 479 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 CALCBP10092 127 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 COL9A1P20849 921 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 HCCSP53701 268 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 JAM3Q9BX67 310 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 GPR84Q9NQS5 396 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 SLC2A10O95528 541 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 Q7L0L9 218 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 LACC1Q8IV20 430 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 OR5M9Q8NGP3 310 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 OR1L3Q8NH93 324 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 SPNS1Q9H2V7 528 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 HRH4Q9H3N8 390 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 TNFSF14O43557 240 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 FAM109BQ6ICB4 259 aaPredicted RBP22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 GABRG3Q99928 467 aa22.75■■□□□ 1.23
SPIRE1-202ENST00000409402 C1orf196B1AJZ1 125 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 NPY4RP50391 375 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 RGS7BPQ6MZT1 257 aaPredicted RBP22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 SIAH3Q8IW03 269 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 ZNF486Q96H40 463 aaPredicted RBP22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 FBXL4Q9UKA2 621 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 OR2A25A4D2G3 310 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 CHRNB1P11230 501 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 B4GALT1P15291 398 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 SRP9P49458 86 aaKnown RBP22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 DBPQ10586 325 aaPredicted RBP22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 FAM199XQ6PEV8 388 aaPredicted RBP22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 SEC22AQ96IW7 307 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 ANKRD61A6NGH8 418 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 TLE4Q04727 773 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 ACSM5Q6NUN0 579 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 GABARAPL1Q9H0R8 117 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 HSBP1L1C9JCN9 74 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 RPL11P62913 178 aaKnown RBP22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 MRPS34P82930 218 aaKnown RBP22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 ZDHHC23Q8IYP9 409 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 ARSGQ96EG1 525 aa22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 FAM212BQ9NTI7 297 aaPredicted RBP22.74■■□□□ 1.23
SPIRE1-202ENST00000409402 IGHV3-64DA0A0J9YX35 117 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 OR2W5A6NFC9 320 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 HSPB2A8KAH6 182 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 HSPB2Q16082 182 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 SYT6Q5T7P8 510 aaPredicted RBP22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 CLEC2LP0C7M8 214 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 ETV1P50549 477 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 SSPNQ14714 243 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 OR4D9Q8NGE8 314 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 SCN9AQ15858 1988 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 BHLHE40O14503 412 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 CLEC3BP05452 202 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 FOLR1P15328 257 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 ARL16Q0P5N6 197 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 RBFOX1Q9NWB1 397 aaKnown RBP22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 DOC2BQ14184 412 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 IAH1Q2TAA2 248 aaPredicted RBP22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 OR10K1Q8NGX5 313 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 FCRL1Q96LA6 429 aa22.73■■□□□ 1.23
SPIRE1-202ENST00000409402 SLC25A21Q9BQT8 299 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms