RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 COMTD1Q86VU5 262 aa12.81□□□□□ -0.36
ITGA6-202ENST00000409080 DEFB108BQ8NET1 73 aa12.81□□□□□ -0.36
ITGA6-202ENST00000409080 GNRHR2Q96P88 292 aa12.81□□□□□ -0.36
ITGA6-202ENST00000409080 PILRBQ9UKJ0 227 aa12.81□□□□□ -0.36
ITGA6-202ENST00000409080 AMDHD2Q9Y303 409 aa12.81□□□□□ -0.36
ITGA6-202ENST00000409080 ANKRD61A6NGH8 418 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 ACOT8O14734 319 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 ARPC1BO15143 372 aaKnown RBP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 CRYBA1P05813 215 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 SUB1P53999 127 aaKnown RBP eCLIP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 SCGB2A2Q13296 93 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 TOMM34Q15785 309 aaPredicted RBP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 PAQR6Q6TCH4 344 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 TFAP2EQ6VUC0 442 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 SLC38A1Q9H2H9 487 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 SLC25A19Q9HC21 320 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 RBMX2Q9Y388 322 aaKnown RBP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 A0A1W2PPV4 95 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 CD3EP07766 207 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 PIPP12273 146 aaPredicted RBP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 ZNF117Q03924 483 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 ZIC1Q15915 447 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 SMN1Q16637 294 aaKnown RBP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 TMEM81Q6P7N7 255 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 MDGA2Q7Z553 956 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 MRGPREQ86SM8 312 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 TMEM200AQ86VY9 491 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 OR10J5Q8NHC4 309 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 RAB1BQ9H0U4 201 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 PLEKHF2Q9H8W4 249 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 C12orf10Q9HB07 376 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 C1orf123Q9NWV4 160 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 SLC25A37Q9NYZ2 338 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 HNRNPFP52597 415 aaKnown RBP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 RAB1AP62820 205 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 RAB35Q15286 201 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 LRRC10Q5BKY1 277 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 SYS1Q8N2H4 156 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 FAM26EQ8N5C1 309 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 C12orf45Q8N5I9 185 aaPredicted RBP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 ALKBH3Q96Q83 286 aaPredicted RBP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 UBQLN2Q9UHD9 624 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 TMEM129A0AVI4 362 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 MCCD1P59942 119 aaPredicted RBP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 RPS25P62851 125 aaKnown RBP12.8□□□□□ -0.36
ITGA6-202ENST00000409080 DCAF10Q5QP82 559 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 SFXN4Q6P4A7 337 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 OR5B12Q96R08 314 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 S1PR3Q99500 378 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 NOX3Q9HBY0 568 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 ZNF391Q9UJN7 358 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 R4GMQ9 66 aa12.8□□□□□ -0.36
ITGA6-202ENST00000409080 KIAA1217Q5T5P2 1943 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 TRDV1A0A1B0GX56 115 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 FAM60AQ9NP50 221 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 ZNF816-ZNF321PA0A0X1KG74 233 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 CT45A6P0DMU7 189 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 CT45A5P0DMU8 189 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 CT45A7P0DMV0 189 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 CT45A8P0DMV1 189 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 CT45A9P0DMV2 189 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SPRED3Q2MJR0 410 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 CT45A2Q5DJT8 189 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 CT45A1Q5HYN5 189 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 CT45A3Q8NHU0 189 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 LRRC3BQ96PB8 259 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SHARPINQ9H0F6 387 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 GABARAPL1Q9H0R8 117 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 MYOZ1Q9NP98 299 aaPredicted RBP12.79□□□□□ -0.36
ITGA6-202ENST00000409080 EXOSC3Q9NQT5 275 aaKnown RBP12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 C17orf112F2Z3M2 114 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 NDUFB3O43676 98 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SRMP19623 302 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SLC36A1Q7Z2H8 476 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 NUFIP2Q7Z417 695 aaKnown RBP12.79□□□□□ -0.36
ITGA6-202ENST00000409080 GCNT2Q8N0V5 402 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 OR10D3Q8NH80 312 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 LGALS14Q8TCE9 139 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 C3orf49Q96BT1 292 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 RIMS4Q9H426 269 aaPredicted RBP12.79□□□□□ -0.36
ITGA6-202ENST00000409080 KCNIP2Q9NS61 270 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 MYO10Q9HD67 2058 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 H3BMQ9 156 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 TERTO14746 1132 aaKnown RBP12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SPINT1O43278 529 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 HOXD4P09016 255 aaPredicted RBP12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SFRP5Q5T4F7 317 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 RNLSQ5VYX0 342 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SLC23A3Q6PIS1 610 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 GTPBP8Q8N3Z3 284 aaPredicted RBP12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SLC35G3Q8N808 338 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SLAMF9Q96A28 289 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 ARHGDIGQ99819 225 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 GDF2Q9UK05 429 aaPredicted RBP12.79□□□□□ -0.36
ITGA6-202ENST00000409080 SCN1AP35498 2009 aa12.79□□□□□ -0.36
ITGA6-202ENST00000409080 HS3ST1O14792 307 aa12.78□□□□□ -0.36
ITGA6-202ENST00000409080 S100A2P29034 98 aa12.78□□□□□ -0.36
ITGA6-202ENST00000409080 PMPCAQ10713 525 aa12.78□□□□□ -0.36
ITGA6-202ENST00000409080 FZD5Q13467 585 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms