RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 VSIG4Q9Y279 399 aa8.79□□□□□ -1
MSH2-202ENST00000406134 LOC107986453A0A1B0GWG9 222 aa8.78□□□□□ -1
MSH2-202ENST00000406134 POM121CA8CG34 1229 aa8.78□□□□□ -1
MSH2-202ENST00000406134 SHISA8B8ZZ34 492 aa8.78□□□□□ -1
MSH2-202ENST00000406134 TIAF1O95411 115 aa8.78□□□□□ -1
MSH2-202ENST00000406134 PGCP20142 388 aa8.78□□□□□ -1
MSH2-202ENST00000406134 HTR2CP28335 458 aa8.78□□□□□ -1
MSH2-202ENST00000406134 SSBP1Q04837 148 aaKnown RBP8.78□□□□□ -1
MSH2-202ENST00000406134 PMPCAQ10713 525 aa8.78□□□□□ -1
MSH2-202ENST00000406134 NSDHLQ15738 373 aa8.78□□□□□ -1
MSH2-202ENST00000406134 MPPED2Q15777 294 aa8.78□□□□□ -1
MSH2-202ENST00000406134 ALKAL2Q6UX46 152 aa8.78□□□□□ -1
MSH2-202ENST00000406134 SHISA6Q6ZSJ9 500 aa8.78□□□□□ -1
MSH2-202ENST00000406134 STPG2Q8N412 459 aa8.78□□□□□ -1
MSH2-202ENST00000406134 SLC25A45Q8N413 288 aa8.78□□□□□ -1
MSH2-202ENST00000406134 OR1J2Q8NGS2 313 aa8.78□□□□□ -1
MSH2-202ENST00000406134 SLC6A7Q99884 636 aa8.78□□□□□ -1
MSH2-202ENST00000406134 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.78□□□□□ -1
MSH2-202ENST00000406134 ATG5Q9H1Y0 275 aa8.78□□□□□ -1
MSH2-202ENST00000406134 MYOZ1Q9NP98 299 aaPredicted RBP8.78□□□□□ -1
MSH2-202ENST00000406134 MYEF2Q9P2K5 600 aaKnown RBP8.78□□□□□ -1
MSH2-202ENST00000406134 MTCH2Q9Y6C9 303 aa8.78□□□□□ -1
MSH2-202ENST00000406134 L7N2F9 121 aa8.78□□□□□ -1
MSH2-202ENST00000406134 CD8AP01732 235 aa8.78□□□□□ -1
MSH2-202ENST00000406134 FGF2P09038 288 aa8.78□□□□□ -1
MSH2-202ENST00000406134 PPP3CBP16298 524 aa8.78□□□□□ -1
MSH2-202ENST00000406134 ZP3P21754 424 aa8.78□□□□□ -1
MSH2-202ENST00000406134 FBXW4P57775 412 aa8.78□□□□□ -1
MSH2-202ENST00000406134 CTAG1AP78358 180 aa8.78□□□□□ -1
MSH2-202ENST00000406134 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
MSH2-202ENST00000406134 ZNF260Q3ZCT1 412 aa8.78□□□□□ -1
MSH2-202ENST00000406134 PRSS58Q8IYP2 241 aa8.78□□□□□ -1
MSH2-202ENST00000406134 OR4S1Q8NGB4 309 aa8.78□□□□□ -1
MSH2-202ENST00000406134 LRRC20Q8TCA0 184 aa8.78□□□□□ -1
MSH2-202ENST00000406134 ZNF775Q96BV0 537 aaPredicted RBP8.78□□□□□ -1
MSH2-202ENST00000406134 C1orf147Q96MC9 270 aaPredicted RBP8.78□□□□□ -1
MSH2-202ENST00000406134 WDR77Q9BQA1 342 aaPredicted RBP8.78□□□□□ -1
MSH2-202ENST00000406134 SOX7Q9BT81 388 aa8.78□□□□□ -1
MSH2-202ENST00000406134 DHDHQ9UQ10 334 aa8.78□□□□□ -1
MSH2-202ENST00000406134 CNTRLQ7Z7A1 2325 aa8.78□□□□□ -1
MSH2-202ENST00000406134 A0A0A6YYD4 124 aa8.78□□□□□ -1
MSH2-202ENST00000406134 RAB27BO00194 218 aa8.78□□□□□ -1
MSH2-202ENST00000406134 PIAS2O75928 621 aa8.78□□□□□ -1
MSH2-202ENST00000406134 RLN2P04090 185 aa8.78□□□□□ -1
MSH2-202ENST00000406134 OR4E1P0C645 316 aa8.78□□□□□ -1
MSH2-202ENST00000406134 GP1BBP13224 206 aa8.78□□□□□ -1
MSH2-202ENST00000406134 PRSS3P35030 304 aa8.78□□□□□ -1
MSH2-202ENST00000406134 UBXN2BQ14CS0 331 aa8.78□□□□□ -1
MSH2-202ENST00000406134 SHBQ15464 509 aa8.78□□□□□ -1
MSH2-202ENST00000406134 DCXRQ7Z4W1 244 aa8.78□□□□□ -1
MSH2-202ENST00000406134 CDH26Q8IXH8 852 aa8.78□□□□□ -1
MSH2-202ENST00000406134 POC1BQ8TC44 478 aa8.78□□□□□ -1
MSH2-202ENST00000406134 CMBLQ96DG6 245 aa8.78□□□□□ -1
MSH2-202ENST00000406134 ADAT3Q96EY9 351 aaPredicted RBP8.78□□□□□ -1
MSH2-202ENST00000406134 SHARPINQ9H0F6 387 aa8.78□□□□□ -1
MSH2-202ENST00000406134 CNTD2Q9H8S5 307 aa8.78□□□□□ -1
MSH2-202ENST00000406134 MED29Q9NX70 200 aa8.78□□□□□ -1
MSH2-202ENST00000406134 TAS2R8Q9NYW2 309 aa8.78□□□□□ -1
MSH2-202ENST00000406134 ZNF814B7Z6K7 855 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 F5H5P2 479 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 XKRYO14609 159 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 DKK1O94907 266 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 TTRP02766 147 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 RPA2P15927 270 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 ZNF17P17021 662 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 FBLP22087 321 aaKnown RBP8.77□□□□□ -1.01
MSH2-202ENST00000406134 RNF4P78317 190 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 FOXK1P85037 733 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 SPOCK1Q08629 439 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 TSSK4Q6SA08 328 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 ZNF574Q6ZN55 896 aaPredicted RBP8.77□□□□□ -1.01
MSH2-202ENST00000406134 OVCH2Q7RTZ1 564 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 PRSS42Q7Z5A4 293 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 ADGRE4PQ86SQ3 457 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 SLC25A44Q96H78 314 aaPredicted RBP8.77□□□□□ -1.01
MSH2-202ENST00000406134 MRPL13Q9BYD1 178 aaKnown RBP8.77□□□□□ -1.01
MSH2-202ENST00000406134 TBL1XR1Q9BZK7 514 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 MS4A7Q9GZW8 240 aaPredicted RBP8.77□□□□□ -1.01
MSH2-202ENST00000406134 GPN1Q9HCN4 374 aaPredicted RBP8.77□□□□□ -1.01
MSH2-202ENST00000406134 GDF2Q9UK05 429 aaPredicted RBP8.77□□□□□ -1.01
MSH2-202ENST00000406134 OR6C76A6NM76 312 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 E9PLN8 166 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 TEX46H3BTG2 121 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 SULT1C2O00338 296 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 SSX5O60225 188 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 AQP8O94778 261 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 HLA-DQA2P01906 255 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 KLK2P20151 261 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 PXDC1Q5TGL8 231 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 PTCRAQ6ISU1 281 aaPredicted RBP8.77□□□□□ -1.01
MSH2-202ENST00000406134 NAXDQ8IW45 347 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 LINC00469Q8N7U9 141 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 PLPP5Q8NEB5 264 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 RNF133Q8WVZ7 376 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 ZDHHC12Q96GR4 267 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 PTGES2Q9H7Z7 377 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 SLC2A4RGQ9NR83 387 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 OR52A1Q9UKL2 312 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 MKL2Q9ULH7 1088 aa8.77□□□□□ -1.01
MSH2-202ENST00000406134 CPED1A4D0V7 1026 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms