RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 Q6ZRG5 221 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 Q6ZSR9 355 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 TMPRSS11FQ6ZWK6 438 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 OR52H1Q8NGJ2 320 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 MAGT1Q9H0U3 335 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 FAM212BQ9NTI7 297 aaPredicted RBP12.55□□□□□ -0.4
VAPA-202ENST00000400000 PAPLNO95428 1278 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 NAGAP17050 411 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 MMP11P24347 488 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 SRP14P37108 136 aaKnown RBP12.55□□□□□ -0.4
VAPA-202ENST00000400000 MRPL19P49406 292 aaKnown RBP12.55□□□□□ -0.4
VAPA-202ENST00000400000 PRSS12P56730 875 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 HLA-BQ31612 363 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 CNOT2Q9NZN8 540 aaKnown RBP12.55□□□□□ -0.4
VAPA-202ENST00000400000 MMP17Q9ULZ9 603 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 ZNF835Q9Y2P0 537 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 ARL2-SNX15V9GYD0 113 aa12.55□□□□□ -0.4
VAPA-202ENST00000400000 HTR1FP30939 366 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 TGFBR1P36897 503 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 TIGD3Q6B0B8 471 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 SHROOM3Q8TF72 1996 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 F6UZH7 168 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 SH2D1BO14796 132 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 RNF224P0DH78 156 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 EIF1P41567 113 aaKnown RBP12.54□□□□□ -0.4
VAPA-202ENST00000400000 HAAOP46952 286 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 PSMB3P49720 205 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 IL10RAQ13651 578 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 TMEM268Q5VZI3 342 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 PTRH1Q86Y79 214 aaKnown RBP12.54□□□□□ -0.4
VAPA-202ENST00000400000 SLAMF6Q96DU3 332 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 CSF3RQ99062 836 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 MED9Q9NWA0 146 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 TMEM235A6NFC5 223 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 HPNP05981 417 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 TMEM41BQ5BJD5 291 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 WDR31Q8NA23 367 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 KIR3DX1Q9H7L2 352 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 CDK5RAP2Q96SN8 1893 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 MKRN2OSH3BPM6 223 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 CPT2P23786 658 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 ZNF83P51522 516 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 PLK5Q496M5 336 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 MDGA2Q7Z553 956 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 CAMKMTQ7Z624 323 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 CNTN4Q8IWV2 1026 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 C2CD4CQ8TF44 421 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 KCNE4Q8WWG9 221 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 OLFM2O95897 454 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 CD14P08571 375 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 DOC2BQ14184 412 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 FCN2Q15485 313 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 NXNL2Q5VZ03 156 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 METRNLQ641Q3 311 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 OR10K2Q6IF99 312 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 MAVSQ7Z434 540 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 FAM58AQ8N1B3 248 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 C15orf54Q8N8G6 183 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 TMEM230Q96A57 120 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 KIRREL1Q96J84 757 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 A4GALTQ9NPC4 353 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 VIRMAQ69YN4 1812 aaKnown RBP12.54□□□□□ -0.4
VAPA-202ENST00000400000 CCL2P13500 99 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 PPP3CBP16298 524 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 CCR2P41597 374 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 KIAA1024LP59773 190 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 CHCHD4Q8N4Q1 142 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 MS4A6EQ96DS6 147 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 ZNF391Q9UJN7 358 aa12.54□□□□□ -0.4
VAPA-202ENST00000400000 YKT6O15498 198 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 OR7C2O60412 319 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 RGS11O94810 467 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 GLCEO94923 617 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 HTN1P15515 57 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 RAB5CP51148 216 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 HENMT1Q5T8I9 393 aaKnown RBP12.53□□□□□ -0.4
VAPA-202ENST00000400000 ADGRE4PQ86SQ3 457 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 OR2Z1Q8NG97 314 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 SLC35E1Q96K37 410 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 ZNF583Q96ND8 569 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 NAGKQ9UJ70 344 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 ZGLP1P0C6A0 271 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 S100A7P31151 101 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 METAP1P53582 386 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 RELAQ04206 551 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 GPR84Q9NQS5 396 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 GPR31O00270 319 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 ACKR3P25106 362 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 TMEM52BQ4KMG9 183 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 LAIR1Q6GTX8 287 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 NEURL3Q96EH8 262 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 ACY3Q96HD9 319 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 TAF9BQ9HBM6 251 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 HS3ST3A1Q9Y663 406 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 PRRC2BQ5JSZ5 2229 aaKnown RBP12.53□□□□□ -0.4
VAPA-202ENST00000400000 LOC107986453A0A1B0GWG9 222 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 J3KRW8 73 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 TBPP20226 339 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 UBQLN3Q9H347 655 aa12.53□□□□□ -0.4
VAPA-202ENST00000400000 PRDX4Q13162 271 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms