RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 CDH24Q86UP0 819 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 OR6V1Q8N148 313 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 OR9K2Q8NGE7 335 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 OR2T4Q8NH00 348 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 TRMT10AQ8TBZ6 339 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 GHSRQ92847 366 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 ZMYND19Q96E35 227 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 WDYHV1Q96HA8 205 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 C7orf50Q9BRJ6 194 aaKnown RBP17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 ZNF275Q9NSD4 429 aaPredicted RBP17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 ACOXLQ9NUZ1 547 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 LUZP4Q9P127 313 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 COPZ2Q9P299 210 aa17.15■□□□□ 0.34
PDLIM2-204ENST00000397760 A0A1B0GVC2 190 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 DCTN6O00399 190 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 GPRIN2O60269 458 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 UBL3O95164 117 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 SYNGR4O95473 234 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 MRPL3P09001 348 aaKnown RBP17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 CLDN17P56750 224 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 CDK5R1Q15078 307 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 HDDC2Q7Z4H3 204 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 OR6K6Q8NGW6 343 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 OR6X1Q8NH79 312 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 KCNK17Q96T54 332 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 MOKQ9UQ07 419 aa17.14■□□□□ 0.34
PDLIM2-204ENST00000397760 ZNF726A6NNF4 738 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 GLCEO94923 617 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 DHFRP00374 187 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 UCHL1P09936 223 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 MMP15P51511 669 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 ABLIM2Q6H8Q1 611 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 CHMP1BQ7LBR1 199 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 SLC25A44Q96H78 314 aaPredicted RBP17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 ADAD1Q96M93 576 aaKnown RBP17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 ALG12Q9BV10 488 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 CAMK2AQ9UQM7 478 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 FKBP7Q9Y680 259 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 CACNG2Q9Y698 323 aa17.14■□□□□ 0.33
PDLIM2-204ENST00000397760 IGF2RP11717 2491 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 CTDSPLO15194 276 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 SLC16A7O60669 478 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 CYTIPO60759 359 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 CRYABP02511 175 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 RAG2P55895 527 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 SIRPAP78324 504 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 CAMK2DQ13557 499 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 LINC01590Q5TEZ4 76 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 HAVCR2Q8TDQ0 301 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 ZNF385AQ96PM9 386 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 MRPL13Q9BYD1 178 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 ABCG5Q9H222 651 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 MCTS1Q9ULC4 181 aaKnown RBP17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 B9D1Q9UPM9 204 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 CACNA1AO00555 2505 aa17.13■□□□□ 0.33
PDLIM2-204ENST00000397760 C7orf66A4D0T2 115 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 TMEM8BA6NDV4 472 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 ZNF716A6NP11 495 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 AQP7O14520 342 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 IGHG1P01857 330 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 CLRN1P58418 232 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 RASGEF1BQ0VAM2 473 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 MADCAM1Q13477 382 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 CARD17Q5XLA6 110 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 UNQ9370/PRO34162Q6UXP9 181 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 SLC35F2Q8IXU6 374 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 ZIC4Q8N9L1 334 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 RPS4Y2Q8TD47 263 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 PNPLA2Q96AD5 504 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 PELI1Q96FA3 418 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 PLSCR2Q9NRY7 297 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 NUBP2Q9Y5Y2 271 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 PTPRQQ9UMZ3 2332 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 GSTZ1O43708 216 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 PGA4P0DJD7 388 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 PGA3P0DJD8 388 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 EPXP11678 715 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 CTLA4P16410 223 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 CRABP1P29762 137 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 GDI2P50395 445 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 OR10A3P58181 314 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 FAM27D1Q5T7N8 215 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 PLXDC2Q6UX71 529 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 ABHD3Q8WU67 409 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 ZNF775Q96BV0 537 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 HYLS1Q96M11 299 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 RBP7Q96R05 134 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 PRRG4Q9BZD6 226 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 DPAGT1Q9H3H5 408 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 TUBD1Q9UJT1 453 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 SPATA2Q9UM82 520 aa17.12■□□□□ 0.33
PDLIM2-204ENST00000397760 ZNF879B4DU55 563 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 TFP02787 698 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 FMODQ06828 376 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 MRPL28Q13084 256 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 LYPD4Q6UWN0 246 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 SSX6Q7RTT6 188 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 GLCCI1Q86VQ1 547 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 ZNF511Q8NB15 262 aa17.11■□□□□ 0.33
PDLIM2-204ENST00000397760 NOXO1Q8NFA2 376 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms