RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ZNHIT3Q15649 155 aaPredicted RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 GFOD2Q3B7J2 385 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 KRBOX4Q5JUW0 171 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 FHL5Q5TD97 284 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 TMEM244Q5VVB8 128 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 NKAIN2Q5VXU1 208 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 LEG1Q6P5S2 330 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 FBXO46Q6PJ61 603 aaPredicted RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 Q6ZS52 159 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 FCRLAQ7L513 359 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 SLC36A1Q7Z2H8 476 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 OOSP2Q86WS3 158 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 MUC20Q8N307 709 aaPredicted RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 RNF141Q8WVD5 230 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 ANKRD9Q96BM1 317 aaPredicted RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 TM4SF19Q96DZ7 209 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 ZNF764Q96H86 408 aaPredicted RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 PIGQQ9BRB3 760 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 JAM3Q9BX67 310 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 METTL9Q9H1A3 318 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 WDR13Q9H1Z4 485 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 RPS10P5Q9NQ39 176 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 MED17Q9NVC6 651 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 FAM86C1Q9NVL1 165 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 SOHLH2Q9NX45 425 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 GAR1Q9NY12 217 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 IKZF2Q9UKS7 526 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 WASF3Q9UPY6 502 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 TRAV1-2A0A0B4J238 106 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 A0A0B4J2E0 115 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 A0A1B0GX12 115 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 PRR32B1ATL7 298 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 MASP2O00187 686 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 DCTN6O00399 190 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 PLPP2O43688 288 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 WISP1O95388 367 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 IFNA2P01563 188 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 TMIGD3P0DMS9 266 aaPredicted RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 MYF5P13349 255 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 ACAA2P42765 397 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 TSFMP43897 325 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 TAS2R43P59537 309 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 NANOS3P60323 173 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 SIRPAP78324 504 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 MGAT2Q10469 447 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 TDGQ13569 410 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 ENPP2Q13822 863 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 DNLZQ5SXM8 178 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 PRAMEF8Q5VWM4 474 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 PRAMEF7Q5VXH5 474 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 ARMC6Q6NXE6 501 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 ACOT7LQ6ZUV0 252 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 TMPRSS11FQ6ZWK6 438 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 CMTM4Q8IZR5 234 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 KDM8Q8N371 416 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 OR51A4Q8NGJ6 313 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 OR2G2Q8NGZ5 317 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 BAHD1Q8TBE0 780 aaPredicted RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 C15orf40Q8WUR7 153 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 PPP1R14AQ96A00 147 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 ZNF524Q96C55 264 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 SLC25A36Q96CQ1 311 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 MISP3Q96FF7 219 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 MARS2Q96GW9 593 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 MRPL37Q9BZE1 423 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 OR8D2Q9GZM6 311 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 TWSG1Q9GZX9 223 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 PRDM13Q9H4Q3 707 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 PNO1Q9NRX1 252 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 DNAJB12Q9NXW2 375 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 TNFSF18Q9UNG2 199 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 KCNIP3Q9Y2W7 256 aa4.54□□□□□ -1.68
SSR1-202ENST00000397511 TMEM184BQ9Y519 407 aaPredicted RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 URB1O60287 2271 aaKnown RBP4.54□□□□□ -1.68
SSR1-202ENST00000397511 C2orf72A6NCS6 295 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 PRR19A6NJB7 356 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 A6NLC8 198 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ACOT7O00154 380 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 MBTPS2O43462 519 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ZFPL1O95159 310 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 LYPD3O95274 346 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 HLA-DQA2P01906 255 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 THBS1P07996 1170 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 HOXB5P09067 269 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 SFTA3P0C7M3 94 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 THEGLP0DJG4 465 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 SMIM10L1P0DMW3 83 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 SLC2A1P11166 492 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CD79AP11912 226 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 NR2C1P13056 603 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 HOXA5P20719 270 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 ITPKBP27987 946 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 AVPR2P30518 371 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 SLC6A6P31641 620 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 DCTDP32321 178 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 OR1D4P47884 311 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 CDX1P47902 265 aaPredicted RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 NUTF2P61970 127 aaKnown RBP4.53□□□□□ -1.68
SSR1-202ENST00000397511 HYAL1Q12794 435 aa4.53□□□□□ -1.68
SSR1-202ENST00000397511 PLA2G7Q13093 441 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms