RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 KCTD9Q7L273 389 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 PPP1R3BQ86XI6 285 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 CSNK1A1LQ8N752 337 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 C12orf76Q8N812 135 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF383Q8NA42 475 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 OR4S1Q8NGB4 309 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 FLVCR1-AS1Q8TAF5 88 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 BADQ92934 168 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 NKD1Q969G9 470 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 PPP1R14AQ96A00 147 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 HIST1H2BAQ96A08 127 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 MARS2Q96GW9 593 aaKnown RBP8.26□□□□□ -1.09
CAPN3-206ENST00000397163 ELF4Q99607 663 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-206ENST00000397163 CMKLR1Q99788 373 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 SLC6A7Q99884 636 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 CCDC3Q9BQI4 270 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 SELENOIQ9C0D9 397 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 IL23AQ9NPF7 189 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 CKLFQ9UBR5 152 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 DHDHQ9UQ10 334 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 RANBP2P49792 3224 aaKnown RBP8.26□□□□□ -1.09
CAPN3-206ENST00000397163 TBC1D3DA0A087WVF3 549 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 DCDC2BA2VCK2 349 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 FITM1A5D6W6 292 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF729A6NN14 1252 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-206ENST00000397163 TBC1D3LB9A6J9 549 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 SULT2B1O00204 365 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 LINC00271P0C7V0 271 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 TBC1D3HP0C7X1 549 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 VAMP1P23763 118 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 HTR2CP28335 458 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 ID4P47928 161 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 CXADRP78310 365 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 RPL18Q07020 188 aaKnown RBP8.26□□□□□ -1.09
CAPN3-206ENST00000397163 DMWDQ09019 674 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 INPP5JQ15735 1006 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-206ENST00000397163 CDNFQ49AH0 187 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 MESTQ5EB52 335 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 OR10K2Q6IF99 312 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 TBC1D3CQ6IPX1 549 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 NPSR1Q6W5P4 371 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF584Q8IVC4 421 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 TBC1D3Q8IZP1 549 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-206ENST00000397163 OR13C8Q8NGS7 320 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 THRSPQ92748 146 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 ARL11Q969Q4 196 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 S100PBPQ96BU1 408 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 LPAR4Q99677 370 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 KXD1Q9BQD3 176 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 G6PC3Q9BUM1 346 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 OR2S2Q9NQN1 319 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 VSIG4Q9Y279 399 aa8.26□□□□□ -1.09
CAPN3-206ENST00000397163 C5orf51A6NDU8 294 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 TMEM235A6NFC5 223 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 TNFSF14O43557 240 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PRKNO60260 465 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 ADH1BP00325 375 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 SNRNP70P08621 437 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 SFTA3P0C7M3 94 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF735P0CB33 412 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 HPGDP15428 266 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 IL13RA1P78552 427 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PPP1R1AQ13522 171 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PDZD11Q5EBL8 140 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 JAGN1Q8N5M9 183 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 LRRC75AQ8NAA5 344 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 AKR7LQ8NHP1 331 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 OR1E3Q8WZA6 343 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 TSACCQ96A04 125 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 SLC41A2Q96JW4 573 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 VSTM2LQ96N03 204 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PRO1933Q9H354 126 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 MKI67P46013 3256 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 C13orf42A0A1B0GVH6 325 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 NPIPB9F8W1W9 429 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 ZNF208O43345 1280 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 CD2P06729 351 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 S1PR1P21453 382 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PMPCAQ10713 525 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 ELOCQ15369 112 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 RNASE10Q5GAN6 216 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 TMEM225Q6GV28 225 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PAPD4Q6PIY7 484 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 LYG2Q86SG7 212 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 SEMA6DQ8NFY4 1073 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 OR9A4Q8NGU2 314 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 STOML3Q8TAV4 291 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 GTF3AQ92664 365 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 SLAMF9Q96A28 289 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 C14orf144Q96I85 54 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 TSPAN32Q96QS1 320 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PHB2Q99623 299 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 PIGQQ9BRB3 760 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 SUCNR1Q9BXA5 334 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 CST11Q9H112 138 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 MTIF3Q9H2K0 278 aaKnown RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 SLCO5A1Q9H2Y9 848 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 MYOZ1Q9NP98 299 aaPredicted RBP8.25□□□□□ -1.09
CAPN3-206ENST00000397163 MMP25Q9NPA2 562 aa8.25□□□□□ -1.09
CAPN3-206ENST00000397163 TAS2R4Q9NYW5 299 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms