RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 OTPQ5XKR4 325 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 ZNF813Q6ZN06 617 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 CFAP77Q6ZQR2 320 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 Q6ZT83 130 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 TUBA1AQ71U36 451 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.94□□□□□ -0.5
MCF2L-209ENST00000397036 GHSRQ92847 366 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 FBXO17Q96EF6 278 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 ZNF281Q9Y2X9 895 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 R4GMQ9 66 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 OR4C45A6NMZ5 311 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 TTLL8A6PVC2 850 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 PSMD9O00233 223 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 RER1O15258 196 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 SLC19A2O60779 497 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 GATBO75879 557 aaKnown RBP11.93□□□□□ -0.5
MCF2L-209ENST00000397036 ATE1O95260 518 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 APOC1P02654 83 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 MMP7P09237 267 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-209ENST00000397036 TMIGD3P0DMS9 266 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-209ENST00000397036 GDI2P50395 445 aaKnown RBP11.93□□□□□ -0.5
MCF2L-209ENST00000397036 PER3P56645 1201 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 NANOS3P60323 173 aaKnown RBP11.93□□□□□ -0.5
MCF2L-209ENST00000397036 RPS25P62851 125 aaKnown RBP11.93□□□□□ -0.5
MCF2L-209ENST00000397036 FAPQ12884 760 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 ZNF829Q3KNS6 432 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-209ENST00000397036 CCDC92Q53HC0 331 aaPredicted RBP11.93□□□□□ -0.5
MCF2L-209ENST00000397036 ELFN2Q5R3F8 820 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 ANKRD16Q6P6B7 361 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 ARL9Q6T311 187 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 PAMR1Q6UXH9 720 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 UNQ9370/PRO34162Q6UXP9 181 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 SLC16A14Q7RTX9 510 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 GCNT2Q8N0V5 402 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 UBE2J2Q8N2K1 259 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 ZFP41Q8N8Y5 198 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 ABHD4Q8TB40 342 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 RPL3LQ92901 407 aaKnown RBP11.93□□□□□ -0.5
MCF2L-209ENST00000397036 STARD4Q96DR4 205 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 C4orf45Q96LM5 186 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 SFXN3Q9BWM7 321 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 TTTY10Q9BZA0 68 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 HDHD2Q9H0R4 259 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 CENPMQ9NSP4 180 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 PTTG2Q9NZH5 202 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 FRRS1LQ9P0K9 344 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 PRSS50Q9UI38 385 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 GSTK1Q9Y2Q3 226 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 GRIP1Q9Y3R0 1128 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 ATRXP46100 2492 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 DOCK7Q96N67 2140 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 ATMQ13315 3056 aa11.93□□□□□ -0.5
MCF2L-209ENST00000397036 IGHV3-9P01782 118 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 GLI4P10075 376 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 B4GALT1P15291 398 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 PSMB10P40306 273 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 FABP5Q01469 135 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 NFATC3Q12968 1075 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 RAB35Q15286 201 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 SLC36A2Q495M3 483 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 YIF1BQ5BJH7 314 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 C1QTNF12Q5T7M4 302 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 KLHL24Q6TFL4 600 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 PCSK4Q6UW60 755 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 USP43Q70EL4 1123 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.92□□□□□ -0.5
MCF2L-209ENST00000397036 CATSPERDQ86XM0 798 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 SKA3Q8IX90 412 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 ST6GALNAC3Q8NDV1 305 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 C1orf162Q8NEQ5 155 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-209ENST00000397036 IL17RDQ8NFM7 739 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 THRSPQ92748 146 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 BCL2L2Q92843 193 aaPredicted RBP11.92□□□□□ -0.5
MCF2L-209ENST00000397036 DACH2Q96NX9 599 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 KCNJ15Q99712 375 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 CHCHD6Q9BRQ6 235 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 C12orf49Q9H741 205 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 MOB1AQ9H8S9 216 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 TXNL4BQ9NX01 149 aaKnown RBP11.92□□□□□ -0.5
MCF2L-209ENST00000397036 ZGRF1Q86YA3 2104 aa11.92□□□□□ -0.5
MCF2L-209ENST00000397036 ZZEF1O43149 2961 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 SGCEO43556 437 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 RGS9O75916 674 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-209ENST00000397036 RPP14O95059 124 aaKnown RBP11.91□□□□□ -0.5
MCF2L-209ENST00000397036 ZFPL1O95159 310 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 PNPP00491 289 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 ISG15P05161 165 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 ITGA5P08648 1049 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 COX5BP10606 129 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 COX5AP20674 150 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 ARR3P36575 388 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 PSMA6P60900 246 aaKnown RBP11.91□□□□□ -0.5
MCF2L-209ENST00000397036 VBP1P61758 197 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 RPS11P62280 158 aaKnown RBP eCLIP11.91□□□□□ -0.5
MCF2L-209ENST00000397036 SLC3A1Q07837 685 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 FOXF2Q12947 444 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 P2RY6Q15077 328 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 KRTAP27-1Q3LI81 207 aa11.91□□□□□ -0.5
MCF2L-209ENST00000397036 PRR30Q53SZ7 412 aaPredicted RBP11.91□□□□□ -0.5
MCF2L-209ENST00000397036 OR7E24Q6IFN5 339 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms