RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 GLT8D1Q68CQ7 371 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 BEST3Q8N1M1 668 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 OR10S1Q8NGN2 331 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 MOB1AQ9H8S9 216 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 MOV10Q9HCE1 1003 aaKnown RBP13.28□□□□□ -0.28
CBX3-202ENST00000396386 TMEM9BQ9NQ34 198 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 COPZ2Q9P299 210 aa13.28□□□□□ -0.28
CBX3-202ENST00000396386 PAIP2BQ9ULR5 123 aaKnown RBP13.28□□□□□ -0.28
CBX3-202ENST00000396386 C21orf140B9A014 251 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 NPIPA2E9PIF3 369 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 NPIPA3F8WFD2 350 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 P2RY10O00398 339 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 DNPH1O43598 174 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 ECDO95905 644 aaPredicted RBP13.27□□□□□ -0.28
CBX3-202ENST00000396386 ITGA5P08648 1049 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 ARSBP15848 533 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 CDAP32320 146 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 DLSTP36957 453 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 CSNK1A1P48729 337 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 AP3S2P59780 193 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 PSMA6P60900 246 aaKnown RBP13.27□□□□□ -0.28
CBX3-202ENST00000396386 ZFP69Q49AA0 526 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 OR52I2Q8NH67 350 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 KCNE4Q8WWG9 221 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 FCAMRQ8WWV6 532 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 GPR87Q9BY21 358 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 NIPAL2Q9H841 368 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 NEK6Q9HC98 313 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 DDX28Q9NUL7 540 aaKnown RBP13.27□□□□□ -0.28
CBX3-202ENST00000396386 NUBP2Q9Y5Y2 271 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 NCKAP5O14513 1909 aa13.27□□□□□ -0.28
CBX3-202ENST00000396386 LOC100289279A0A1B0GTE1 492 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 A0A1W2PNU3 283 aaPredicted RBP13.27□□□□□ -0.29
CBX3-202ENST00000396386 ACOT7O00154 380 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 TNFSF11O14788 317 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 DOK2O60496 412 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 GLSO94925 669 aaPredicted RBP13.27□□□□□ -0.29
CBX3-202ENST00000396386 ZNF806P0C7X5 589 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 HSD11B1P28845 292 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 POU3F4P49335 361 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 NKX2-5P52952 324 aaPredicted RBP13.27□□□□□ -0.29
CBX3-202ENST00000396386 B3GALT5-AS1P59052 145 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 MFAP5Q13361 173 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 KCNJ8Q15842 424 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 MTFR2Q6P444 385 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 CREB3L2Q70SY1 520 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 PLPP7Q8NBV4 271 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 OR9K2Q8NGE7 335 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 OR51D1Q8NGF3 324 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 OR6N1Q8NGY5 312 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 OR14L1PQ8NHC6 308 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 GCDHQ92947 438 aaPredicted RBP13.27□□□□□ -0.29
CBX3-202ENST00000396386 OR2M2Q96R28 347 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 NUDT15Q9NV35 164 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 GLTPQ9NZD2 209 aa13.27□□□□□ -0.29
CBX3-202ENST00000396386 CACNA1CQ13936 2221 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 WDR87Q6ZQQ6 2873 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 IGHV3-15A0A0B4J1V0 119 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 A0A0J9YW62 118 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 LOC101059948A0A1B0GTJ6 334 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 MEGF11A6BM72 1044 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 LRRC3CA6NJW4 275 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 TTRP02766 147 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 MT-ND4P03905 459 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 ACSM4P0C7M7 580 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 CYB561P49447 251 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 GABREP78334 506 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 TAF13Q15543 124 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 FAM166AQ6J272 317 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 RHOUQ7L0Q8 258 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 ELMOD2Q8IZ81 293 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 NKAIN3Q8N8D7 197 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 OR6M1Q8NGM8 313 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 TMEM54Q969K7 222 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 PNPLA2Q96AD5 504 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 FAM3DQ96BQ1 224 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 THOC3Q96J01 351 aaKnown RBP13.26□□□□□ -0.29
CBX3-202ENST00000396386 UCN2Q96RP3 112 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 PBOV1Q9GZY1 135 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 SLC17A5Q9NRA2 495 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 ASH2LQ9UBL3 628 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 POU2F3Q9UKI9 436 aa13.26□□□□□ -0.29
CBX3-202ENST00000396386 RBMX2Q9Y388 322 aaKnown RBP13.26□□□□□ -0.29
CBX3-202ENST00000396386 DHFRP00374 187 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 TCRBP04435 133 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 TMIGD3P0DMS9 266 aaPredicted RBP13.25□□□□□ -0.29
CBX3-202ENST00000396386 GIFP27352 417 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 RAB25P57735 213 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 OC90Q02509 493 aaPredicted RBP13.25□□□□□ -0.29
CBX3-202ENST00000396386 PLA2G7Q13093 441 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 SNTB2Q13425 540 aaKnown RBP13.25□□□□□ -0.29
CBX3-202ENST00000396386 C10orf128Q5T292 105 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 JMJD6Q6NYC1 403 aaPredicted RBP13.25□□□□□ -0.29
CBX3-202ENST00000396386 ANKRD16Q6P6B7 361 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 AKAP1Q92667 903 aaKnown RBP eCLIP13.25□□□□□ -0.29
CBX3-202ENST00000396386 CACNG6Q9BXT2 260 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 RCE1Q9Y256 329 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 PCDHGA1Q9Y5H4 931 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 CFAP54Q96N23 3096 aa13.25□□□□□ -0.29
CBX3-202ENST00000396386 VPS13AQ96RL7 3174 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms