RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 C1orf198Q9H425 327 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 CDH20Q9HBT6 801 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 CBLN4Q9NTU7 201 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 TVP23BQ9NYZ1 205 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 POLR1DQ9Y2S0 133 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 LRRC42Q9Y546 428 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 HSPE1-MOB4S4R3N1 261 aa14.28□□□□□ -0.12
CXCL1-201ENST00000395761 C5orf49A4QMS7 147 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 PSKH1P11801 424 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 GDI2P50395 445 aaKnown RBP14.27□□□□□ -0.13
CXCL1-201ENST00000395761 HIST1H3AP68431 136 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 SNAPC1Q16533 368 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 SLC25A30Q5SVS4 291 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 C6orf52Q5T4I8 152 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 HIST2H3PS2Q5TEC6 136 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 ZNF691Q5VV52 312 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 PLBD1Q6P4A8 553 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 HIST2H3AQ71DI3 136 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 VASH1Q7L8A9 365 aaPredicted RBP14.27□□□□□ -0.13
CXCL1-201ENST00000395761 LINC00346Q8IVM7 164 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 ALDH16A1Q8IZ83 802 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 ZNF511Q8NB15 262 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 OR10H5Q8NGA6 315 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 OR8J1Q8NGP2 316 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 OTULINQ96BN8 352 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 PERPQ96FX8 193 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 APOL4Q9BPW4 351 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 CXorf56Q9H5V9 222 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 ZNF442Q9H7R0 627 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 WDR76Q9H967 626 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 ZNF701Q9NV72 531 aaPredicted RBP14.27□□□□□ -0.13
CXCL1-201ENST00000395761 SPEF1Q9Y4P9 236 aa14.27□□□□□ -0.13
CXCL1-201ENST00000395761 RTTNQ86VV8 2226 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 PRRC2AP48634 2157 aaKnown RBP14.26□□□□□ -0.13
CXCL1-201ENST00000395761 SGCEO43556 437 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 DENRO43583 198 aaKnown RBP14.26□□□□□ -0.13
CXCL1-201ENST00000395761 SYNGR3O43761 229 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 MPZL2O60487 215 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 DOK2O60496 412 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 PAX1P15863 534 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 GLRXP35754 106 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 WNT5AP41221 380 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 RPS27P42677 84 aaKnown RBP14.26□□□□□ -0.13
CXCL1-201ENST00000395761 PTH2RP49190 550 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 ERVS71-1P61550 626 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 SNRPGP62308 76 aaKnown RBP14.26□□□□□ -0.13
CXCL1-201ENST00000395761 SWI5Q1ZZU3 235 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 LINC01590Q5TEZ4 76 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 CPOQ8IVL8 374 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 SETD9Q8NE22 299 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 RHOXF1Q8NHV9 184 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 SLC7A6Q92536 515 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 ANKRD60Q9BZ19 345 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 HINT3Q9NQE9 182 aaKnown RBP14.26□□□□□ -0.13
CXCL1-201ENST00000395761 PLEK2Q9NYT0 353 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 FZR1Q9UM11 496 aa14.26□□□□□ -0.13
CXCL1-201ENST00000395761 MAP1AP78559 2803 aaPredicted RBP14.25□□□□□ -0.13
CXCL1-201ENST00000395761 USF3Q68DE3 2245 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 TMEM129A0AVI4 362 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 OR6C6A6NF89 314 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 M0R129 80 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 PRKYO43930 277 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 TMCC2O75069 709 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 NDUFS7O75251 213 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 ZNF823P16415 610 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 GABRB1P18505 474 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 PCSK6P29122 969 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 FMO3P31513 532 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 HTR5AP47898 357 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 UCP2P55851 309 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 ISL1P61371 349 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 SLC18B1Q6NT16 456 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 CFAP77Q6ZQR2 320 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 KRTAP1-3Q8IUG1 177 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 ZNF101Q8IZC7 436 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 TCEANCQ8N8B7 351 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 BBS1Q8NFJ9 593 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 GJC3Q8NFK1 279 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 OR6K6Q8NGW6 343 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 OR1F12Q8NHA8 337 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 FAM81AQ8TBF8 368 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 TMEM163Q8TC26 289 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 UBE2FQ969M7 185 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 PLEKHA8Q96JA3 519 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 CDADC1Q9BWV3 514 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 CACNG6Q9BXT2 260 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 MRPL37Q9BZE1 423 aaKnown RBP14.25□□□□□ -0.13
CXCL1-201ENST00000395761 GSX2Q9BZM3 304 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 OR51V1Q9H2C8 321 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 IMPAD1Q9NX62 359 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 CYB5R1Q9UHQ9 305 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 GDF2Q9UK05 429 aaPredicted RBP14.25□□□□□ -0.13
CXCL1-201ENST00000395761 CMAHPQ9Y471 501 aa14.25□□□□□ -0.13
CXCL1-201ENST00000395761 PRR23D1E9PI22 279 aaPredicted RBP14.24□□□□□ -0.13
CXCL1-201ENST00000395761 TLX2O43763 284 aaPredicted RBP14.24□□□□□ -0.13
CXCL1-201ENST00000395761 CLIC3O95833 236 aa14.24□□□□□ -0.13
CXCL1-201ENST00000395761 NGFP01138 241 aa14.24□□□□□ -0.13
CXCL1-201ENST00000395761 GNAO1P09471 354 aa14.24□□□□□ -0.13
CXCL1-201ENST00000395761 PRR23D2P0DMB1 279 aaPredicted RBP14.24□□□□□ -0.13
CXCL1-201ENST00000395761 COX5BP10606 129 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms