RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 SAV1Q9H4B6 383 aaPredicted RBP12.45□□□□□ -0.42
SNCA-204ENST00000394989 KLHL13Q9P2N7 655 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 RCE1Q9Y256 329 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 A0A1W2PNR3 127 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 COX6A1P12074 109 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 EFNB2P52799 333 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 FADS6Q8N9I5 356 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 COQ8AQ8NI60 647 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 MRPL13Q9BYD1 178 aaKnown RBP12.45□□□□□ -0.42
SNCA-204ENST00000394989 KCNK15Q9H427 330 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 G6PC2Q9NQR9 355 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 SDHAF3Q9NRP4 125 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 EMC9Q9Y3B6 208 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 COL27A1Q8IZC6 1860 aaPredicted RBP12.45□□□□□ -0.42
SNCA-204ENST00000394989 LOC101059948A0A1B0GTJ6 334 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 KLK2P20151 261 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 ANGPT1Q15389 498 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 C3orf33Q6P1S2 294 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 OR51D1Q8NGF3 324 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 MR1Q95460 341 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 UBQLN2Q9UHD9 624 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 NXT1Q9UKK6 140 aaKnown RBP12.44□□□□□ -0.42
SNCA-204ENST00000394989 RPH3AQ9Y2J0 694 aaPredicted RBP12.44□□□□□ -0.42
SNCA-204ENST00000394989 HS3ST3B1Q9Y662 390 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 AQP8O94778 261 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 TPPPO94811 219 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 CER1O95813 267 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 ANXA3P12429 323 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 TAS2R20P59543 309 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 SLC22A10Q63ZE4 541 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 C17orf107Q6ZR85 190 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 RBPMSQ93062 196 aaKnown RBP12.44□□□□□ -0.42
SNCA-204ENST00000394989 RBP7Q96R05 134 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 C7orf50Q9BRJ6 194 aaKnown RBP12.44□□□□□ -0.42
SNCA-204ENST00000394989 HRASLSQ9HDD0 168 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 KLHL9Q9P2J3 617 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 PTRH2Q9Y3E5 179 aaKnown RBP12.44□□□□□ -0.42
SNCA-204ENST00000394989 R4GMQ9 66 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 LINC00862A6NCI5 91 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 MASP2O00187 686 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 RAMP1O60894 148 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 ZNF823P16415 610 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 POU3F2P20265 443 aaPredicted RBP12.44□□□□□ -0.42
SNCA-204ENST00000394989 MC2RQ01718 297 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 TMEM225Q6GV28 225 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 FAM166AQ6J272 317 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 SLC23A3Q6PIS1 610 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 DNM1P34Q6PK57 102 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 ZNF782Q6ZMW2 699 aaPredicted RBP12.44□□□□□ -0.42
SNCA-204ENST00000394989 ZNF227Q86WZ6 799 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 LIX1LQ8IVB5 337 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 PLPP7Q8NBV4 271 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 ZNF700Q9H0M5 742 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 HEXA-AS1Q9H8Q6 139 aa12.44□□□□□ -0.42
SNCA-204ENST00000394989 PHF3Q92576 2039 aaKnown RBP12.43□□□□□ -0.42
SNCA-204ENST00000394989 CELSR3Q9NYQ7 3312 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 A0A1W2PPL8 197 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 SULT1B1O43704 296 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 KLK3P07288 261 aaPredicted RBP12.43□□□□□ -0.42
SNCA-204ENST00000394989 MNDAP41218 407 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 GSG1Q2KHT4 349 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 ALKAL2Q6UX46 152 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 DNM1P46Q6ZS02 220 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 OR5B2Q96R09 309 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 CMKLR1Q99788 373 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 OR51J1Q9H342 316 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 GPN3Q9UHW5 284 aaPredicted RBP12.43□□□□□ -0.42
SNCA-204ENST00000394989 FLVCR2Q9UPI3 526 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 DHDHQ9UQ10 334 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 KRT33AO76009 404 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 IFNA7P01567 189 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 IGFBP3P17936 291 aaPredicted RBP12.43□□□□□ -0.42
SNCA-204ENST00000394989 TRA2AQ13595 282 aaKnown RBP eCLIP12.43□□□□□ -0.42
SNCA-204ENST00000394989 LPAL2Q16609 132 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 SFRP4Q6FHJ7 346 aaPredicted RBP12.43□□□□□ -0.42
SNCA-204ENST00000394989 UXS1Q8NBZ7 420 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 OR11G2Q8NGC1 345 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 LHFPL5Q8TAF8 219 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 FCAMRQ8WWV6 532 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 C11orf40Q8WZ69 217 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 METTL17Q9H7H0 456 aaPredicted RBP12.43□□□□□ -0.42
SNCA-204ENST00000394989 COPZ2Q9P299 210 aa12.43□□□□□ -0.42
SNCA-204ENST00000394989 M0R233 179 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 TRAF3IP2O43734 574 aaPredicted RBP12.42□□□□□ -0.42
SNCA-204ENST00000394989 LMX1BO60663 402 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 KHDRBS3O75525 346 aaKnown RBP12.42□□□□□ -0.42
SNCA-204ENST00000394989 KDM4BO94953 1096 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 HOXD4P09016 255 aaPredicted RBP12.42□□□□□ -0.42
SNCA-204ENST00000394989 ACSM4P0C7M7 580 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 SFTPDP35247 375 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 RPL35P42766 123 aaKnown RBP12.42□□□□□ -0.42
SNCA-204ENST00000394989 SCAND1P57086 179 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 OC90Q02509 493 aaPredicted RBP12.42□□□□□ -0.42
SNCA-204ENST00000394989 MFAP5Q13361 173 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 FAAP20Q6NZ36 180 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 LRFN4Q6PJG9 635 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 BTN2A1Q7KYR7 527 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 OR10S1Q8NGN2 331 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 RNF133Q8WVZ7 376 aa12.42□□□□□ -0.42
SNCA-204ENST00000394989 CXorf58Q96LI9 332 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms