RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 MTNR1BP49286 362 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 EGR3Q06889 387 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 SCN1BQ07699 218 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 IKZF1Q13422 519 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 SFXN4Q6P4A7 337 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 ESPNLQ6ZVH7 1005 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 ZNF679Q8IYX0 411 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 MS4A15Q8N5U1 240 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 ZNF433Q8N7K0 673 aaPredicted RBP13.26□□□□□ -0.29
MKS1-202ENST00000393119 ZNF676Q8N7Q3 588 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 OR52N5Q8NH56 324 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 OR6X1Q8NH79 312 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 RPS4Y2Q8TD47 263 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 ADGRG7Q96K78 797 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 OR2M2Q96R28 347 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.26□□□□□ -0.29
MKS1-202ENST00000393119 DEFB127Q9H1M4 99 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 RNF121Q9H920 327 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 LHFPL6Q9Y693 200 aa13.26□□□□□ -0.29
MKS1-202ENST00000393119 TRAV8-7A0A075B6U6 113 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 ZNF879B4DU55 563 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 NPIPA2E9PIF3 369 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 NPIPA3F8WFD2 350 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 TFECO14948 347 aaPredicted RBP13.25□□□□□ -0.29
MKS1-202ENST00000393119 RER1O15258 196 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 EFSO43281 561 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 SP1P08047 785 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 FAM157BP0CG42 384 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 LIPCP11150 499 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 SLC2A1P11166 492 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 CEACAM1P13688 526 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 SNRPBP14678 240 aaKnown RBP13.25□□□□□ -0.29
MKS1-202ENST00000393119 ATF1P18846 271 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 APEX1P27695 318 aaKnown RBP13.25□□□□□ -0.29
MKS1-202ENST00000393119 LAP3P28838 519 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 KIR2DL3P43628 341 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 MEOX1P50221 254 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 SLC25A47Q6Q0C1 308 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 FAM131AQ6UXB0 335 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 ZNF767PQ75MW2 155 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 LRRC18Q8N456 261 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 ADPRHL1Q8NDY3 354 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 COQ7Q99807 217 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 ASH2LQ9UBL3 628 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 C5orf63A6NC05 138 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 NPIPB13A6NJU9 1138 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 NPIPB4C9JG80 1138 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 HLA-DQB1P01920 261 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 UCHL1P09936 223 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 ELK1P19419 428 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 CSRP1P21291 193 aaKnown RBP13.25□□□□□ -0.29
MKS1-202ENST00000393119 PLGLB1Q02325 96 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 SGCAQ16586 387 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 THEM4Q5T1C6 240 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 CNIH2Q6PI25 160 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 MDS2Q8NDY4 140 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 ZC3HAV1LQ96H79 300 aaKnown RBP13.25□□□□□ -0.29
MKS1-202ENST00000393119 C4orf45Q96LM5 186 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 SOX7Q9BT81 388 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 PRELID1Q9Y255 219 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 AUP1Q9Y679 476 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 TMEM14AQ9Y6G1 99 aa13.25□□□□□ -0.29
MKS1-202ENST00000393119 OR5H15A6NDH6 313 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 LEUTXA8MZ59 168 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 CDK2AP1O14519 115 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 ADRA2CP18825 462 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 SRMP19623 302 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 RAB3BP20337 219 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 PRKACBP22694 351 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 ARG2P78540 354 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 CD83Q01151 205 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 HIST3H3Q16695 136 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 DEFB109BQ30KR1 87 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 HSD17B12Q53GQ0 312 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 ESCO2Q56NI9 601 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 HES5Q5TA89 166 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 UNQ9370/PRO34162Q6UXP9 181 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 UBE2J2Q8N2K1 259 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 GDPD1Q8N9F7 314 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 OR6N1Q8NGY5 312 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 BEX2Q9BXY8 128 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 CYB5R1Q9UHQ9 305 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 BOKQ9UMX3 212 aaPredicted RBP13.24□□□□□ -0.29
MKS1-202ENST00000393119 DNAJC13O75165 2243 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 MAS1P04201 325 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 EIF4EP06730 217 aaKnown RBP13.24□□□□□ -0.29
MKS1-202ENST00000393119 RAC3P60763 192 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 CSNK2A1P68400 391 aaPredicted RBP13.24□□□□□ -0.29
MKS1-202ENST00000393119 CLN3Q13286 438 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 TAB1Q15750 504 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 ZNF239Q16600 458 aaKnown RBP13.24□□□□□ -0.29
MKS1-202ENST00000393119 ASPHD2Q6ICH7 369 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 SLC25A25Q6KCM7 469 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 KCTD20Q7Z5Y7 419 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 OR2V1Q8NHB1 315 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 RNF128Q8TEB7 428 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 DCBLD2Q96PD2 775 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 RBM24Q9BX46 236 aaKnown RBP13.24□□□□□ -0.29
MKS1-202ENST00000393119 GLTPQ9NZD2 209 aa13.24□□□□□ -0.29
MKS1-202ENST00000393119 FABP12A6NFH5 140 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms