RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 HSD17B10Q99714 261 aaKnown RBP11.37□□□□□ -0.59
CHD3-203ENST00000380358 KNTC1P50748 2209 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 OPRK1P41145 380 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 CLDN15P56746 228 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 OXA1LQ15070 435 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 SCD5Q86SK9 330 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 OR5A2Q8NGI9 324 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 KCNG3Q8TAE7 436 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 ERGIC1Q969X5 290 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 MOB1AQ9H8S9 216 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 IGKV3D-11A0A0A0MRZ8 115 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 IGKV3-11P04433 115 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 ACP2P11117 423 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 SUOXP51687 545 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 RAB40BQ12829 278 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 C3orf30Q96M34 536 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 NKX2-1P43699 371 aaPredicted RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 ALKBH1Q13686 389 aaKnown RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 TBCEQ15813 527 aaPredicted RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 FAAP20Q6NZ36 180 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 CDAP32320 146 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 DCAF7P61962 342 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 RPS23P62266 143 aaKnown RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 BTF3L4Q96K17 158 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 HAPLN2Q9GZV7 340 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 MYH13Q9UKX3 1938 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 K7ESM1 405 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 CXCL13O43927 109 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 HOXD13P35453 343 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 GABARAPL2P60520 117 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 MAML2Q8IZL2 1156 aaPredicted RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 KISS1RQ969F8 398 aaPredicted RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 L3HYPDHQ96EM0 354 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 SLC22A12Q96S37 553 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 TMEM140Q9NV12 185 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 GPR55Q9Y2T6 319 aaPredicted RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 A0A1B0GX78 115 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 XKRY2A2RUG3 117 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 FABP7O15540 132 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 EIF1BO60739 113 aaKnown RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 GABRB3P28472 473 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 HTR4Q13639 388 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 HES3Q5TGS1 186 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 RGS7BPQ6MZT1 257 aaPredicted RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 LRP11Q86VZ4 500 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 VRK3Q8IV63 474 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 SLC39A11Q8N1S5 342 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 LINC00052Q96N35 136 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 UBE2L5PA0A1B0GUS4 154 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 A0A1B0GWA3 101 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 LRIT2A6NDA9 550 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 ANKUB1A6NFN9 424 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 FIGNL2A6NMB9 653 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 H3BMH7 237 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 TYROBPO43914 113 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 MGPP08493 103 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 TPMTP51580 245 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 PRDX1Q06830 199 aaKnown RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 RTP4Q96DX8 246 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 EXOSC3Q9NQT5 275 aaKnown RBP11.36□□□□□ -0.59
CHD3-203ENST00000380358 FSCN3Q9NQT6 498 aa11.36□□□□□ -0.59
CHD3-203ENST00000380358 TRAV34A0A0B4J273 112 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 PPP3CBP16298 524 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 CD200P41217 278 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 OR2B8PP59922 312 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 ERVFC1-1P60608 527 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 HTRA4P83105 476 aaPredicted RBP11.35□□□□□ -0.59
CHD3-203ENST00000380358 NAAAQ02083 359 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 EXT1Q16394 746 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 OR11G2Q8NGC1 345 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 OR1J1Q8NGS3 322 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 KCNE4Q8WWG9 221 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 FAM3DQ96BQ1 224 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 Q96M85 177 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 SEMA4GQ9NTN9 838 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 PEAK1Q9H792 1746 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 PDGFBP01127 241 aaPredicted RBP11.35□□□□□ -0.59
CHD3-203ENST00000380358 FPR3P25089 353 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 AKR1C3P42330 323 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 C1orf140Q5VVS0 124 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 OR6S1Q8NH40 331 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 ACSS1Q9NUB1 689 aaPredicted RBP11.35□□□□□ -0.59
CHD3-203ENST00000380358 CSAG2Q9Y5P2 127 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 FER1L4A9Z1Z3 1794 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 B4GALT1P15291 398 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 HOXA4Q00056 320 aaPredicted RBP11.35□□□□□ -0.59
CHD3-203ENST00000380358 ZNF266Q14584 549 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 NKAIN1Q4KMZ8 207 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 FRMPD2BQ6IN97 320 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 PXT1Q8NFP0 134 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 OR51S1Q8NGJ8 323 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 RPL3LQ92901 407 aaKnown RBP11.35□□□□□ -0.59
CHD3-203ENST00000380358 DCAF13Q9NV06 445 aaKnown RBP11.35□□□□□ -0.59
CHD3-203ENST00000380358 ASH2LQ9UBL3 628 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 SETBP1Q9Y6X0 1596 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 DUSP1P28562 367 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 RAB15P59190 212 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 SUMO1P63165 101 aaKnown RBP11.35□□□□□ -0.59
CHD3-203ENST00000380358 MOB1BQ7L9L4 216 aa11.35□□□□□ -0.59
CHD3-203ENST00000380358 LTB4R2Q9NPC1 389 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms