RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 BATF2Q8N1L9 274 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 ZNF321PQ8N8H1 164 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 TMEM80Q96HE8 168 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 RNF170Q96K19 258 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 HYLS1Q96M11 299 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 TMEM68Q96MH6 324 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 FAM234AQ9H0X4 552 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 METTL17Q9H7H0 456 aaPredicted RBP5.89□□□□□ -1.47
NEDD9-202ENST00000379446 MMP25Q9NPA2 562 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 GLRX2Q9NS18 164 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 CLN8Q9UBY8 286 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 OSGIN1Q9UJX0 560 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 RPL36Q9Y3U8 105 aaKnown RBP5.89□□□□□ -1.47
NEDD9-202ENST00000379446 MAB21L2Q9Y586 359 aa5.89□□□□□ -1.47
NEDD9-202ENST00000379446 TRAV36DV7A0A075B6V5 113 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 A0A0G2JMP0 313 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 ZNF205O95201 554 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 PPP1R3DO95685 299 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 GLAP06280 429 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 STOMP27105 288 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 CD79BP40259 229 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 GZMKP49863 264 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 ARF1P84077 181 aaKnown RBP5.88□□□□□ -1.47
NEDD9-202ENST00000379446 SYPL1Q16563 259 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 SWI5Q1ZZU3 235 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 ELP2Q6IA86 826 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 CNIH2Q6PI25 160 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 PAQR6Q6TCH4 344 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 OR8B3Q8NGG8 313 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 APH1BQ8WW43 257 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 LRR1Q96L50 414 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 MRGPRX4Q96LA9 322 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 OR8B2Q96RD0 313 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 TMEM43Q9BTV4 400 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 TRAF4Q9BUZ4 470 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-202ENST00000379446 CCDC32Q9BV29 185 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 UCK1Q9HA47 277 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 COPS3Q9UNS2 423 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 DICER1Q9UPY3 1922 aaKnown RBP5.88□□□□□ -1.47
NEDD9-202ENST00000379446 KCNE1BA0A087WTH5 132 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 IRGMA1A4Y4 181 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 TSPAN11A1L157 253 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 L7N2F9 121 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 HPGDSO60760 199 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 S100A6P06703 90 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 CD3GP09693 182 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 CBR1P16152 277 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 RHCEP18577 417 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 EPHA1P21709 976 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 GZMMP51124 257 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 HNF4GQ14541 408 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 FAM69AQ5T7M9 428 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 TMEM65Q6PI78 240 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 MAMSTRQ6ZN01 415 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 KCTD20Q7Z5Y7 419 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 TUSC5Q8IXB3 177 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 OR10X1Q8NGY0 326 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 ZFAND1Q8TCF1 268 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 LIPHQ8WWY8 451 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 MIB2Q96AX9 1013 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 ELP4Q96EB1 424 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 C7orf34Q96L11 122 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 NRTNQ99748 197 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 PRR14Q9BWN1 585 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 GABARAPL1Q9H0R8 117 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 CXorf36Q9H7Y0 433 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 EXTL2Q9UBQ6 330 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 SH2B3Q9UQQ2 575 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 ZSWIM8A7E2V4 1837 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 USP9XQ93008 2570 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-202ENST00000379446 DOCK9Q9BZ29 2069 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 OR2M5A3KFT3 312 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 LEUTXA8MZ59 168 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 ANGPTL7O43827 346 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 SIX6O95475 246 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 RLN1P04808 185 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 DEFA4P12838 97 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 SELEP16581 610 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 GLRA1P23415 457 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 GALNSP34059 522 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 IRF3Q14653 427 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 SEC23BQ15437 767 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 YIF1BQ5BJH7 314 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 ZNF684Q5T5D7 378 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 METTL11BQ5VVY1 283 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 SFRP4Q6FHJ7 346 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-202ENST00000379446 FAHD1Q6P587 224 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 ZNF547Q8IVP9 402 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 OR6V1Q8N148 313 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 MUC15Q8N387 334 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 ZNF680Q8NEM1 530 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 OR2T33Q8NG76 320 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 TMEM239Q8WW34 195 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 AP3S1Q92572 193 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 KCTD7Q96MP8 289 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 MND1Q9BWT6 205 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 PPA2Q9H2U2 334 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 SPNS1Q9H2V7 528 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 GLIPR2Q9H4G4 154 aa5.88□□□□□ -1.47
NEDD9-202ENST00000379446 WDR76Q9H967 626 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms