RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 HPRT1P00492 218 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 C8AP07357 584 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 CCNOP22674 350 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 PBX2P40425 430 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 FABP6P51161 128 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 ZXDBP98169 803 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 ST3GAL3Q11203 375 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 MRPL52Q86TS9 123 aaKnown RBP10.74□□□□□ -0.69
NPHP4-202ENST00000378161 SELENOHQ8IZQ5 122 aaKnown RBP10.74□□□□□ -0.69
NPHP4-202ENST00000378161 ABHD3Q8WU67 409 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF48Q96MX3 618 aaPredicted RBP10.74□□□□□ -0.69
NPHP4-202ENST00000378161 STRAPQ9Y3F4 350 aaKnown RBP10.74□□□□□ -0.69
NPHP4-202ENST00000378161 FCMRO60667 390 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 GOSR1O95249 250 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 CTSLP07711 333 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 PRR35P0CG20 571 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 PGA3P0DJD8 388 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 RNLSQ5VYX0 342 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 UNQ6494/PRO21346Q6UXR6 183 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF620Q6ZNG0 422 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 TMEM183AQ8IXX5 376 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 TTC9BQ8N6N2 239 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 OR5P2Q8WZ92 322 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 DVL3Q92997 716 aaPredicted RBP10.74□□□□□ -0.69
NPHP4-202ENST00000378161 SCAMP4Q969E2 229 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 DIRC2Q96SL1 478 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 SEMA6CQ9H3T2 930 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 R3HDMLQ9H3Y0 253 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 LSM5Q9Y4Y9 91 aaKnown RBP10.74□□□□□ -0.69
NPHP4-202ENST00000378161 CTDSPLO15194 276 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF264O43296 627 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 XRCC3O43542 346 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 SOD2P04179 222 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 SEMG1P04279 462 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 SLC25A4P12235 298 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 CEBPDP49716 269 aaPredicted RBP10.74□□□□□ -0.69
NPHP4-202ENST00000378161 RIPPLY3P57055 190 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 TPPP2P59282 170 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 INSL4Q14641 139 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 TCEA2Q15560 299 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 NUFIP2Q7Z417 695 aaKnown RBP10.74□□□□□ -0.69
NPHP4-202ENST00000378161 OR5K2Q8NHB8 316 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 ASB11Q8WXH4 323 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 GHSRQ92847 366 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 RAB8BQ92930 207 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 SARGQ9BW04 601 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 FAM117AQ9C073 453 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 FTSJ1Q9UET6 329 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 SCN4AP35499 1836 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 A0A1W2PRU2 124 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 ADCYAP1P18509 176 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 NT5EP21589 574 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 H2BFSP57053 126 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 SELENOVP59797 346 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 RAB11AP62491 216 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 SPOCK1Q08629 439 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 ENDOGQ14249 297 aaKnown RBP10.73□□□□□ -0.69
NPHP4-202ENST00000378161 EIPR1Q53HC9 387 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 CTSL3PQ5NE16 218 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 TECPR1Q7Z6L1 1165 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 RERGQ96A58 199 aaPredicted RBP10.73□□□□□ -0.69
NPHP4-202ENST00000378161 SOSTQ9BQB4 213 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 MKKSQ9NPJ1 570 aaPredicted RBP10.73□□□□□ -0.69
NPHP4-202ENST00000378161 SEMA5BQ9P283 1151 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 ADAM29Q9UKF5 820 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 SCN9AQ15858 1988 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 PGA4P0DJD7 388 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 PGA5P0DJD9 388 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 MST1P26927 711 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 APLNRP35414 380 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 RGRP47804 291 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 PRPS1P60891 318 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 MRPS11P82912 194 aaKnown RBP10.73□□□□□ -0.69
NPHP4-202ENST00000378161 FAM27D1Q5T7N8 215 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 MEX3BQ6ZN04 569 aaKnown RBP10.73□□□□□ -0.69
NPHP4-202ENST00000378161 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
NPHP4-202ENST00000378161 KCND3Q9UK17 655 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 SRCAPQ6ZRS2 3230 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 A0A1W2PQ45 241 aaPredicted RBP10.73□□□□□ -0.69
NPHP4-202ENST00000378161 A0A1W2PQY0 241 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 H7BYZ3 331 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 CCL16O15467 120 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 ITGB2P05107 769 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 CRHP06850 196 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF20P17024 532 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 P2RX1P51575 399 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 TAS2R20P59543 309 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 LTBQ06643 244 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 CDPF1Q6NVV7 123 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 VRK2Q86Y07 508 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 BAGE3Q86Y29 109 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 BAGE2Q86Y30 109 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 OR6N1Q8NGY5 312 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 C4orf36Q96KX1 117 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 HIST1H2BLQ99880 126 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 NRIP3Q9NQ35 241 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 SIRT3Q9NTG7 399 aaPredicted RBP10.73□□□□□ -0.69
NPHP4-202ENST00000378161 OSER1Q9NX31 292 aa10.73□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF346Q9UL40 294 aaKnown RBP10.73□□□□□ -0.69
NPHP4-202ENST00000378161 KIAA0100Q14667 2235 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms