RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ARSGQ96EG1 525 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 Q96M85 177 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ATF6BQ99941 703 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ISG20L2Q9H9L3 353 aaKnown RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 KIF13AQ9H1H9 1805 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 PRKNO60260 465 aaPredicted RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 HIST1H1CP16403 213 aaKnown RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 SPI1P17947 270 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 PSMB3P49720 205 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 THBS3P49746 956 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 MFAP5Q13361 173 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 MPPED2Q15777 294 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 C8orf44Q96CB5 159 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 BOD1Q96IK1 185 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 SLC25A21Q9BQT8 299 aaPredicted RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 SPACA1Q9HBV2 294 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 A0A1W2PRD5 423 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 A0A1W2PRF3 423 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 A0A1W2PRM7 423 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 SMAD7O15105 426 aaKnown RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ALOX12BO75342 701 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 SLC35E2P0CK97 266 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ELLP55199 621 aaPredicted RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ARL16Q0P5N6 197 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 OTUD1Q5VV17 481 aaPredicted RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 YRDCQ86U90 279 aaKnown RBP10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 FBXL6Q8N531 539 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 OR6M1Q8NGM8 313 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 FAM174AQ8TBP5 190 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ZFPM2Q8WW38 1151 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 IKZF5Q9H5V7 419 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ITGB4P16144 1822 aa10.95□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF816-ZNF321PA0A0X1KG74 233 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 UMAD1C9J7I0 102 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 APOA2P02652 100 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 CATR1Q13166 79 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 HES3Q5TGS1 186 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF321PQ8N8H1 164 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 SFT2D1Q8WV19 159 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 MENTQ9BUN1 341 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 SPNS1Q9H2V7 528 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 MTCH1Q9NZJ7 389 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 HLA-HP01893 362 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 CCL7P80098 99 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 TMEM52BQ4KMG9 183 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 CAMKMTQ7Z624 323 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 WDR5BQ86VZ2 330 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 FAM185AQ8N0U4 392 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 OR2F2O95006 317 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 THBS1P07996 1170 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 CD14P08571 375 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 RAB11AP62491 216 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 OR2F1Q13607 317 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 HABP2Q14520 560 aaPredicted RBP10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 IHHQ14623 411 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 STACQ99469 402 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 MBNL1Q9NR56 388 aaKnown RBP10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 SPHK1Q9NYA1 384 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 ECI1P42126 302 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 ID4P47928 161 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 PGFP49763 221 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 HYAL1Q12794 435 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 CMTM4Q8IZR5 234 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 IGHV3-15A0A0B4J1V0 119 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 AKR7A3O95154 331 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 RFX2P48378 723 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 C17orf67Q0P5P2 114 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 LPCAT3Q6P1A2 487 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 OR52B4Q8NGK2 314 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 FGF14Q92915 247 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 SARGQ9BW04 601 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 TAS2R5Q9NYW4 299 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 MYOTQ9UBF9 498 aa10.94□□□□□ -0.66
PCDHA9-201ENST00000378122 NKX6-3A6NJ46 265 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 OR8U8P0C7N1 319 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 ARRB2P32121 409 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 MAP2K6P52564 334 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF133P52736 654 aaPredicted RBP10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 SRPXP78539 464 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 PRSS36Q5K4E3 855 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 AUNIPQ9H7T9 357 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 GPR173Q9NS66 373 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 CYB5BO43169 146 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 CYTIPO60759 359 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 SBK2P0C263 348 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 ENPP1P22413 925 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 IGFBP6P24592 240 aaPredicted RBP10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 HAGHQ16775 308 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 C5orf46Q6UWT4 87 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 ZNF620Q6ZNG0 422 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 FN3KRPQ9HA64 309 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 AK3Q9UIJ7 227 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 SBK3P0C264 359 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 C1orf140Q5VVS0 124 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 RBMXL3Q8N7X1 1067 aaKnown RBP10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 BPIFCQ8NFQ6 507 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 PHYHIPQ92561 330 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 FBXO17Q96EF6 278 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 SLC46A1Q96NT5 459 aa10.93□□□□□ -0.66
PCDHA9-201ENST00000378122 FAM103A1Q9BTL3 118 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms